Query= MSMg01no460_k24.b1 MSMg01no460_k24.b1 CHROMAT_FILE:
MSMg01no460_k24.b1 PHD_FILE: MSMg01no460_k24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:01 2005
(456 letters)
>mm_chr10_82967997_82968852
Length = 856
Score = 849 bits (439), Expect = 0.0
Identities = 448/451 (99%)
Strand = Plus / Plus
Query: 6 gaattctagcctgtttctctggttcccgtgctgtgacacaggaaaggtctctcctgatgc 65
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctagcctggttctctggttcccgtgctgtgacacaggaaaggtctctcctgatgc 265
Query: 66 ctgtgtccttacccagaataagggtaacagctatctgtttcctacccatgattgctctaa 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ctgtgtccttacccagaataagggtaacagctatctgtttcctacccatgattgctctaa 325
Query: 126 ccatggtcacagttttatttttttttaattatttcatgtgcagtggtattttgcctacat 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ccatggtcacagttttatttttttttaattatttcatgtgcagtggtattttgcctacat 385
Query: 186 gtatgtctgtatgagggtgtcagatcccaaacaactggagttaaagacagctgtaatgtg 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gtatgtctgtatgagggtgtcagatcccaaacaactggagttaaagacagctgtaatgtg 445
Query: 246 ccatgtgggtgctaggaattgaacccaggtcccctggaaaagcagcaagtgttcttagcc 305
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 446 ccatgtgggtgctaggaattgaacacaggtcccctggaaaagcagcaagtgttcttagcc 505
Query: 306 actgagccatatctctagccccacatgattacagtcttaatatacgcctataattcatgt 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 actgagccatatctctagccccacatgattacagtcttaatatacgcctataattcatgt 565
Query: 366 attggagacttaatctccactgtggagcagagtctaatgcaaaatatgtgagccgtgagg 425
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 attggagacttaatttccactgtggagcagagtctaatgcaaaatatgtgagccgtgagg 625
Query: 426 ctctacccttgagaatgggctcatactgtaa 456
|||||||||||||||||||||||||||||||
Sbjct: 626 ctctacccttgagaatgggctcatactgtaa 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no460_k24.g1 MSMg01no460_k24.g1 CHROMAT_FILE:
MSMg01no460_k24.g1 PHD_FILE: MSMg01no460_k24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:01 2005
(511 letters)
>mm_chr10_83149644_83150553
Length = 910
Score = 980 bits (507), Expect = 0.0
Identities = 510/511 (99%), Gaps = 1/511 (0%)
Strand = Plus / Minus
Query: 1 atattgaatagctctcttctttctttctttttttttttaaagacaaacacaagaaaccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 atattgaatagctctcttctttctttctttttttttttaaagacaaacacaagaaaccaa 651
Query: 61 ctttatagtcctctatatacaggataaagacataaggcactttccatatgattgaaatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ctttatagtcctctatatacaggataaagacataaggcactttccatatgattgaaatta 591
Query: 121 tttacaaacactatcatacaaaagaacatgcaaattgggagtagttccccaaatgagcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tttacaaacactatcatacaaaagaacatgcaaattgggagtagttccccaaatgagcac 531
Query: 181 actatccagacattttgatagggttaaatacctgagagaagagcattgagggacaatttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 actatccagacattttgatagggttaaatacctgagagaagagcattgagggacaatttg 471
Query: 241 ttttggtttatagcggagacgttttagtccattctgtttaggaagacacagatgagcaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ttttggtttatagcggagacgttttagtccattctgtttaggaagacacagatgagcaca 411
Query: 301 gcaggtcgtgtcagagcagctaggaagcgggaacgggagagcattgctgaagctagagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gcaggtcgtgtcagagcagctaggaagcgggaacgggagagcattgctgaagctagagtt 351
Query: 361 ttctttctctgttttattttattttattctagttaaacatatatttattccatggagatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ttctttctctgttttattttattttattctagttaaacatatatttattccatggagatt 291
Query: 421 ccacttatttaaaacacaaccaccaaattctcaagattcaatttatgtcagcaagtaatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ccacttatttaaaacacaaccaccaaattctcaagattcaatttatgtcagcaagtaatc 231
Query: 481 acatttttcaagttgtggtagcttgaataag 511
||| |||||||||||||||||||||||||||
Sbjct: 230 aca-ttttcaagttgtggtagcttgaataag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 910
Length adjustment: 10
Effective length of query: 501
Effective length of database: 900
Effective search space: 450900
Effective search space used: 450900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
