Query= MSMg01no460_m22.b1 MSMg01no460_m22.b1 CHROMAT_FILE:
MSMg01no460_m22.b1 PHD_FILE: MSMg01no460_m22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:10 2005
(479 letters)
>mm_chr10_100902972_100903850
Length = 879
Score = 857 bits (443), Expect = 0.0
Identities = 467/475 (98%)
Strand = Plus / Minus
Query: 5 gaattcacttttaacaactcataaaaactttcaaacaaacatattgtatgataaattttg 64
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gaattcacttctaaaaactcataaaaactttcaaacaaacatattgtatgataaattttg 620
Query: 65 ttattcgttccagcaaagactagatttttcactagcagtttccttaaaaatacctaaaat 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 619 ttattcgttccagcaaagactagatttttcactagcagtttccttaaaaatacctaaagt 560
Query: 125 ctttgcaaatctctgctgcagtcagaaatacatcttaaaattgtttctctgtattaaatg 184
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 559 ctttgcaaatctctgctgcagtcagaaatacatcttaaaattctttctctgtattaaatg 500
Query: 185 aacatactttaagcagactaaattatgctatgtagttaaatcctgtttaattataccaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aacatactttaagcagactaaattatgctatgtagttaaatcctgtttaattataccaat 440
Query: 245 ataatacatgagtcagccttacgtgtgtaactacaatttagaaaggatttgtatagcttt 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 439 ataatacatgagtcagccttacgtgtgtaactacaatttagaaaggatttgtatagattt 380
Query: 305 agaaaaattaatctatccaacaataatgaaatgttgttcatataccaataatcatttgaa 364
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 379 agaaaaattaatctattcaacaataatgaaatgttgttcatataccaataatcacttgag 320
Query: 365 tttactgagaatataaaaaatggataaacaaaagaaaaataatttaagtcagtaggcaat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tttactgagaatataaaaaatggataaacaaaagaaaaataatttaagtcagtaggcaat 260
Query: 425 ttttaagtaggcaatttataatttttttacaagatagagccttctatgtaactta 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ttttaagtaggcaatttataatttttttacaagatagagccttctatgtaactta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 879
Length adjustment: 10
Effective length of query: 469
Effective length of database: 869
Effective search space: 407561
Effective search space used: 407561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no460_m22.g1 MSMg01no460_m22.g1 CHROMAT_FILE:
MSMg01no460_m22.g1 PHD_FILE: MSMg01no460_m22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:10 2005
(475 letters)
>mm_chr10_100752089_100752963
Length = 875
Score = 837 bits (433), Expect = 0.0
Identities = 461/475 (97%), Gaps = 8/475 (1%)
Strand = Plus / Plus
Query: 1 tccacacagtacctgcataaagaagcatcctggtatcagctactggaaaaacacatttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tccacacagtacctgcataaagaagcatcctggtatcagctactggaaaaacacatttct 268
Query: 61 agtcacagaatattttgaagtctactttgactgtaaaaaataaatatatgtaaaaaaatt 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 269 agtcacagaatattttgaagtctactttgactgtaaaaattaaatatatgtaaaaaaatt 328
Query: 121 gagattcaaaattatttaaaaatgtaaaattattgaaaataaaatgtaaagatatttaaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aagattcaaaattatttaaaaatgtaaaattattgaaaataaaatgtaaagatatttaaa 388
Query: 181 tgtgtctaacaatattcaataagaaatttaaaattagtggtacattgaactattttatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tgtgtctaacaatattcaataagaaatttaaaattagtggtacattgaactattttatca 448
Query: 241 tctacctttatacatttataaagagtgtaattttatcgtagatgcttgcatgtttcattc 300
|||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tctacctttata--------aagagtgtaattttatcgtagatgcttgcatgtttcattc 500
Query: 301 ttcagggggattttatgagtatcttctcagagctatacattaaactaatagggatcaaat 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcaggtggattttatgagtatcttctcagagctatacattaaactaatagggatcaaat 560
Query: 361 tttcctttattctcaaattacttcacagttctgtgactttttttttaatcattatactct 420
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 561 tttcctttattctcaaattacttcacagttctgtgactttatttttaatcattatactca 620
Query: 421 acttcctgatacacaatggagttaaaacatgacttaagttgattcatttttcttt 475
||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acttcctgatacagaatggagttaaaacatgacttaagttgattcatttttcttt 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
