Query= MSMg01no461_m13.b1 MSMg01no461_m13.b1 CHROMAT_FILE:
MSMg01no461_m13.b1 PHD_FILE: MSMg01no461_m13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:31 2005
(204 letters)
>mm_chr10_51840270_51840873
Length = 604
Score = 373 bits (193), Expect = e-108
Identities = 199/201 (99%)
Strand = Plus / Plus
Query: 1 agtatgcactatgtgataccctctacaaaacataacataagcaccttagtttaccattgt 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 agtatgcactatgtgataccctctacaaaacaaaacataagcaccttagtttaccattgt 260
Query: 61 tagcttctaatattgagcaaagatatcacattaaaatctatatctctttcattgcaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagcttctaatattgagcaaagatatcacattaaaatctatatctctttcattgcaataa 320
Query: 121 agatgctcatacctcaagaggggatatatagagaaagaaattattgctgtatgtgctttg 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 agatgctcatacctcaagaggggatatatagagaaagaaattattgttgtatgtgctttg 380
Query: 181 caagtcttcacctccctgggg 201
|||||||||||||||||||||
Sbjct: 381 caagtcttcacctccctgggg 401
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 604
Length adjustment: 8
Effective length of query: 196
Effective length of database: 596
Effective search space: 116816
Effective search space used: 116816
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_m13.g1 MSMg01no461_m13.g1 CHROMAT_FILE:
MSMg01no461_m13.g1 PHD_FILE: MSMg01no461_m13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:31 2005
(426 letters)
>mm_chr10_52065601_52066427
Length = 827
Score = 754 bits (390), Expect = 0.0
Identities = 418/428 (97%), Gaps = 3/428 (0%)
Strand = Plus / Minus
Query: 1 ttgtggctatgatcacagtgacttgactttctgtgttcatccctgttttagagaggagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ttgtggctatgatcacagtgacttgactttctgtgttcatccctgttttagagaggagag 427
Query: 61 attgagtttgaagtagtctacgtggcacctgaagtggattctgacgatgaaaatgtagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 attgagtttgaagtagtctacgtggcacctgaagtggattctgacgatgaaaatgtagag 367
Query: 121 tatgaagacgagagtggacaccgctatcgtctgtatcttgacgagttagaaggttttggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 366 tatgaagacgagagtggacaccgctatcgtctgtatcttgacgagttagaaggcagtggg 307
Query: 181 aattctggtgctagttgcaaagacagcagtggggagatgaaaatgttacaaggtaaaatt 240
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 306 aattctggtgctagttgcaaagacagcagtggcgagatgaaaatgttacaaggtaaaaat 247
Query: 241 tactt--gttttattatgaatgtgttggttattaataacatttcttcttttggttattag 298
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ca-ttcagttttattatgaatgtgttggttattaataacatttcttcttttggttattag 188
Query: 299 agacagggcctaggatggccttgaacttggagatttgcctgcctctgctgcctaagtgct 358
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 agacagggcccaggatggccttgaacttggagatttgcctgcctctgctgcctaagtgct 128
Query: 359 gagattaaagttgtgtacagttgctgccaccacctggcttactatgaatacaattttaat 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gagattaaagttgtgtacagttgctgccaccacctggcttactatgaatacaattttaat 68
Query: 419 gtaaaagc 426
||||||||
Sbjct: 67 gtaaaagc 60
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 827
Length adjustment: 9
Effective length of query: 417
Effective length of database: 818
Effective search space: 341106
Effective search space used: 341106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
