Query= MSMg01no462_l07.b1 MSMg01no462_l07.b1 CHROMAT_FILE:
MSMg01no462_l07.b1 PHD_FILE: MSMg01no462_l07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:48 2005
(243 letters)
>mm_chr10_41108266_41108907
Length = 642
Score = 447 bits (231), Expect = e-130
Identities = 240/243 (98%), Gaps = 1/243 (0%)
Strand = Plus / Minus
Query: 1 gtgggtacacactctatctgacctgttcctatgagccccccttcatactctgttgggtaa 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 442 gtgggtacacactctatctgacctgttcctatgagccccccttcagactctgttgggtaa 383
Query: 61 acagctctgcatgcataaaagctagacatacatctaagcacagatgcagcagttttgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 acagctctgcatgcataaaagctagacatacatctaagcacagatgcagcagttttgaaa 323
Query: 121 ctagagatggaatagtttgcaaattattctgcagcattctttgtgtgcacaaaagaagga 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 322 ctagagatggaatagtttgcaaattattctgcagcattctttgtgtgcataaaagaagga 263
Query: 181 tgctgagacacttttctgtacagctgcaaaactgagaccagtccggtggagcgtggtctg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 -gctgagacacttttctgtacagctgcaaaactgagaccagtccggtggagcgtggtctg 204
Query: 241 gcc 243
|||
Sbjct: 203 gcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 642
Length adjustment: 9
Effective length of query: 234
Effective length of database: 633
Effective search space: 148122
Effective search space used: 148122
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no462_l07.g1 MSMg01no462_l07.g1 CHROMAT_FILE:
MSMg01no462_l07.g1 PHD_FILE: MSMg01no462_l07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:48 2005
(453 letters)
>mm_chr10_40922731_40923583
Length = 853
Score = 783 bits (405), Expect = 0.0
Identities = 441/453 (97%)
Strand = Plus / Plus
Query: 1 acatccagattggcaggcagcaagaagagagagcaagacactcacctggcttgagcatct 60
|||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 201 acatccagatcagcaggcagcaagaagagagaacaagacactcgcctggcttgagcatct 260
Query: 61 gaaacctcaaagcccacaccctgagacacacttcctccaacaaggccacacctcctaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaacctcaaagcccacaccctgagacacacttcctccaacaaggccacacctcctaata 320
Query: 121 gtgtcactccctatgggcctagggtggccactttcatgctcacatcacgtgccaacttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgtcactccctatgggcctagggtggccactttcatgctcacatcacgtgccaacttcc 380
Query: 181 aataggtacctgtattcttagattctcctattctgagctcatcagagtccccagtgctct 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 aataggtacctgtattcttagatcctcctattctgagctcatcagagtccccagtgctct 440
Query: 241 gcacaattcttgtcaccccagtcttcctgggttatgagatttgtagaatacccggctgtg 300
|||||| | || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcacaaaccctggcaccccagtcttcctgggttatgagatttgtagaatacccggctgtg 500
Query: 301 tatgttctgaggtgagtgccatccatgggtgatgccttttgggtgtatcctgtgttaaaa 360
|||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 tatgttctgaggtgagtgccgtccatgggtgatgccatttgggtgtatcctgtgttaaaa 560
Query: 361 ggctttggggaggtgaccgtatcatgagggctctgacataatctctgactgacccactga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggctttggggaggtgaccgtatcatgagggctctgacataatctctgactgacccactga 620
Query: 421 tggatatgtcataatttggtgacattactggaa 453
||||| |||||||||||||||||||||||||||
Sbjct: 621 tggatttgtcataatttggtgacattactggaa 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
