Query= MSMg01no463_n16.b1 MSMg01no463_n16.b1 CHROMAT_FILE:
MSMg01no463_n16.b1 PHD_FILE: MSMg01no463_n16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:25 2005
(626 letters)
>mm_chr10_105557916_105558941
Length = 1026
Score = 1172 bits (606), Expect = 0.0
Identities = 618/622 (99%)
Strand = Plus / Plus
Query: 5 gaattctttcctctcacatcctccctgcccccatttcccttctctagtgaacagaaagaa 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttcctctcagatcctccctgcccccatttcccttctctagtgaacagaaagaa 264
Query: 65 attctctccctttaaaatgttcatgcaattaggtcagctctaatctgtttcttttaagat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attctctccctttaaaatgttcatgcaattaggtcagctctaatctgtttcttttaagat 324
Query: 125 ttgagttcttaattatttctgcaaaatgccttcccagcagtaactaaattactccctgta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgagttcttaattatttctgcaaaatgccttcccagcagtaactaaattactccctgta 384
Query: 185 gcagaatgtctcctgtgcctgcacgtgtcaatatcttaaggtctatttttactagcttgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcagaatgtctcctgtgcctgcacgtgtcaatatcttaaggtctatttttactagcttgc 444
Query: 245 tcagtttactcaaccacagcaagcatttttaaagaaatagagtttagattctcattttgt 304
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcagtttactgaaccacagcaagcatttttaaagaaatagagtttagattctcattttgt 504
Query: 305 gaaagtgtgaacaaattgagaaaatatgagatggcaagaataactcagttttccatgttc 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 505 gaaagtgtgaacaaattgagaaaatatgagatggcaagaataactcagttttccatgtcc 564
Query: 365 tacgtttcttttgtagatgtaggggatgttttaataaaccaggcataatagctctctttc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tacgtttcttttgtagatgtaggggatgttttaataaaccaggcataatagctctctttc 624
Query: 425 tctttaaaagtagtacacaatgtaaatcattcctcctacgttatgcctcagctaaaggaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tctttaaaagtagtacacaatgtaaatcattcctcctacgttatgcctcagctaaaggaa 684
Query: 485 tcccctatatttttctcctgtaagtagagtcagacaaatatcgtttgtttagaaaaacca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tcccctatatttttctcctgtaagtagagtcagacaaatatcgtttgtttagaaaaacca 744
Query: 545 ctttgataggttagataacagggaggaggtggttgcttcactctgcagcaaagcccaagt 604
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 745 ctttgataggttagataacagggaggaggtggttgcttcactctgcagcaaagcccgagt 804
Query: 605 accgatttacctgtttctccaa 626
||||||||||||||||||||||
Sbjct: 805 accgatttacctgtttctccaa 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_n16.g1 MSMg01no463_n16.g1 CHROMAT_FILE:
MSMg01no463_n16.g1 PHD_FILE: MSMg01no463_n16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:25 2005
(552 letters)
>mm_chr10_105727199_105728149
Length = 951
Score = 1013 bits (524), Expect = 0.0
Identities = 545/552 (98%), Gaps = 1/552 (0%)
Strand = Plus / Minus
Query: 1 ccagctctacaaagttctcatttgacccgcactaatgtgatatgcatgtgcgtgctcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 751 ccagctctacaaagttctcatttgacccgcactaatgtgatatgcatgtgcatgctcact 692
Query: 61 aataagtcaaactaatacatacaagctaataatttaaaatattttgggaaaaattaattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 aataagtcaaactaatacatacaagctaataatttaaaatattttgggaaaaattaattc 632
Query: 121 taagaaaatgacattttttgataagtaaattaagttctggtcatgatcactgctaggcta 180
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 631 taagaaaatgacattttttgataagtaaattaag-tctggtcatgatcactgctagacta 573
Query: 181 agaaagagaaatataacaattttccaaaaagtatatttatagcactaaaataggcaaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 agaaagagaaatataacaattttccaaaaagtatatttatagcactaaaataggcaaatg 513
Query: 241 actttttcctttaacttatctctccatatattccaatatgtatcctaagaccccctctcc 300
| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 aatttttccaataacttatctctccatatattccaatatgtatcctaagaccccctctcc 453
Query: 301 attaagtgcatgaaccatcacgttttctttctatcctttgtccaaatttggccaaacact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 attaagtgcatgaaccatcacgttttctttctatcctttgtccaaatttggccaaacact 393
Query: 361 gaacagtctaaaaattaatactgcaggatgactaagtttaccaagtttatattaatctgt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 392 gaacagtctaaaaattaatactgcaggatgactaagtttaccaagtttatattagtctgt 333
Query: 421 tcaaagtagtaaaatcgtgttcaagaatgtgggtgttatgaaacaaaaatcagcacatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tcaaagtagtaaaatcgtgttcaagaatgtgggtgttatgaaacaaaaatcagcacatat 273
Query: 481 gttcaaacattagcaatgcaaagacagggtacagagaatacagagaaaatgtttttgctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gttcaaacattagcaatgcaaagacagggtacagagaatacagagaaaatgtttttgctc 213
Query: 541 agaactagtcag 552
||||||||||||
Sbjct: 212 agaactagtcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 951
Length adjustment: 10
Effective length of query: 542
Effective length of database: 941
Effective search space: 510022
Effective search space used: 510022
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
