Query= MSMg01no464_a14.b1 MSMg01no464_a14.b1 CHROMAT_FILE:
MSMg01no464_a14.b1 PHD_FILE: MSMg01no464_a14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:40 2005
(236 letters)
>mm_chr10_7686338_7686973
Length = 636
Score = 426 bits (220), Expect = e-124
Identities = 232/236 (98%)
Strand = Plus / Minus
Query: 1 caatagcatacatttcaacatttattttgaaaaagaaaaaaaaaagacgttcagaaaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 436 caatagcatacatttcaacatttattttgaaaaagaaaaaaaaaagacgtttagaaaagt 377
Query: 61 ttgtgaatttttctagtaagtaaaccaataattaggtctagacacatgaaaatgatctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 376 ttgtgaatttttctagtaagtaaaccaataattaggtctagacacatgaaaattatctac 317
Query: 121 tgtctctccttaaacccacctccaaacaccacagcaaagactgtcttcatgttttttaaa 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 316 tgtctctccttaaacccacctccaaacaccacagcaaagactggcttcatgttttttaaa 257
Query: 181 tttacattggaattttatccaaagagaaataaggagaaatagtacggagtagagat 236
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 256 tttacattggaattttatccaaagagaaataaggagaaatagtagggagtagagat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no464_a14.g1 MSMg01no464_a14.g1 CHROMAT_FILE:
MSMg01no464_a14.g1 PHD_FILE: MSMg01no464_a14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:40 2005
(423 letters)
>mm_chr10_7516709_7517531
Length = 823
Score = 748 bits (387), Expect = 0.0
Identities = 414/423 (97%)
Strand = Plus / Plus
Query: 1 attctatggaccaggctggttttgaactcagagatctgccttcctttgcttctcaagtgc 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctatagaccaggctggttttgaactcagagatctgccttcctttgcttctcaagtgc 260
Query: 61 tgggaataaagatgtgcaccaccatcgcctggccagactcaagattcttaagccttagcc 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 tgggaataaagatgtgcaccaccatcgcctggccagactcaagattcttatgccttagcc 320
Query: 121 tcctaagtgttagtttatagatgggcgtcatcacacccatctcagtcattattgatttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctaagtgttagtttatagatgggcgtcatcacacccatctcagtcattattgatttgg 380
Query: 181 tttcatgagccagaatctcactctagtccagcctgtcctggaactcactgtattgccttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 tttcatgagccagaatctcactctagtccagcctgtcctggaactcactgtattgcccag 440
Query: 241 gttgttttcaaacttgttaaaatcttctgggcagtggtggttcaatcattacattaaaat 300
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctggtttcaaacttgttaaaatcttctgggcagtggtggttcaatcattacattaaaat 500
Query: 301 aggactcaaactccacagtggttccctaagttcccggaatacctataaggaaaaaggagg 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 aggactcaaactccacagtggttccctaagttcccggaatacctataagggaaaaggagg 560
Query: 361 agcatttgaatcagcagggtgtttataaagacacagtcacactgttccagtaccactgcg 420
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 561 agcatttgaatcagcggggtgtttataaagacacagtcacactgttccagtaccactgtg 620
Query: 421 ctt 423
|||
Sbjct: 621 ctt 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
