Query= MSMg01no464_m15.b1 MSMg01no464_m15.b1 CHROMAT_FILE:
MSMg01no464_m15.b1 PHD_FILE: MSMg01no464_m15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:40 2005
(245 letters)
>mm_chr10_65378446_65379090
Length = 645
Score = 451 bits (233), Expect = e-131
Identities = 242/245 (98%)
Strand = Plus / Plus
Query: 1 cactggacatttttagcagatatgctatagaactgtttctgggacttttacacaagttgg 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 cactggacatttttagcagatatgctatagaactgtttctgggacttgtacacaagttgg 260
Query: 61 ttgttggtctttctcagtgttgttacatcctagtattctagatttcaatgagaggactat 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 ttgttggtctttctcagtgttgttacatcctagtattctagatttaaatgagaggactat 320
Query: 121 cctgtgtggtagagtcattcatgaccactgggaaaaaggcaatgctgctggaacttaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 cctgtgtggtagagtcattcatgaccactgggaaaaaggcaatgctgctggaacttagtt 380
Query: 181 ccatacaaacaagcaaccagaaccatcagaaccatagcatctcaccgatgtgcacactga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccatacaaacaagcaaccagaaccatcagaaccatagcatctcaccgatgtgcacactga 440
Query: 241 tgagt 245
|||||
Sbjct: 441 tgagt 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no464_m15.g1 MSMg01no464_m15.g1 CHROMAT_FILE:
MSMg01no464_m15.g1 PHD_FILE: MSMg01no464_m15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:40 2005
(529 letters)
>mm_chr10_65543260_65544188
Length = 929
Score = 942 bits (487), Expect = 0.0
Identities = 517/531 (97%), Gaps = 10/531 (1%)
Strand = Plus / Minus
Query: 4 gtttttatcagtttcatgagataaccatgtacttaaccttgataataggaatagagacta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 gtttttatcagtttcatgagataaccatgtacttaaccttgataataggaatagagacta 670
Query: 64 aaattgaagattaacagtatcttaattgtttccttggactgtacattatgttcgtactat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 aaattgaagattaacagtatcttaattgtttccttggactgtacattatgttcgtactat 610
Query: 124 tcagtgttatgagaaaacacctctcctcaatattttggctagtaacaatacccatccact 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tcagtgttatgagaaaacacctctcctcaatattttggctagtaacaatacccatccact 550
Query: 184 gtttcttgagactgttttctagaactcaagagatggggatggatctctgtgacatg---- 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gtttcttgagactgttttctagaactcaagagatggggatggatctctgtgacatgggga 490
Query: 240 tttttgaaatcgttcactcatctgcctttacatc-ctgacagcactaaatgcctagtgag 298
|||||| ||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 489 ----tgaaattgttcactcatctgcctttaca-cactgacagcactaaatgcctagtgag 435
Query: 299 gagttattgaaaggtgcttcatagttcattctctttccgtggcctgaccatgccaagctc 358
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 434 gagttattgaaaggtgcttcatagttcattctctctccgtggcctgaccatgcccagctc 375
Query: 359 ttcatctaccgttccctcactcaacaggacaaccattctttatagccaggtattgccatc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ttcatctaccgttccctcactcaacaggacaaccattctttatagccaggtattgccatc 315
Query: 419 cctaaggagaaagtagaaccagtgggcctcctatatctatggaaaaatacaaattaaagg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 cctaaggagaaagtagaaccagtgggcctcctatatctatggaaaaatacaaattaaagg 255
Query: 479 ctgccttaaattcaagagcaatagactcagacatcacattgtggtgggtac 529
|||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ctgccttagattcaagagcaatagactcagacatcacattgtggtgggtac 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space: 476961
Effective search space used: 476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
