Query= MSMg01no464_m23.b1 MSMg01no464_m23.b1 CHROMAT_FILE:
MSMg01no464_m23.b1 PHD_FILE: MSMg01no464_m23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:42 2005
(329 letters)
>mm_chr10_82957318_82958046
Length = 729
Score = 542 bits (280), Expect = e-158
Identities = 316/328 (96%), Gaps = 2/328 (0%)
Strand = Plus / Plus
Query: 3 actcagtcttctggaaactcaatttatccaggaaacataagatacacaggcttattttct 62
||||||||||||||||||||||||||||||||||||||| || |||| || |||||||||
Sbjct: 203 actcagtcttctggaaactcaatttatccaggaaacataggacacacgggtttattttct 262
Query: 63 ttgcaattaccaataacttaaa-caaggagccagtacacatcaacagccaagatagtagt 121
||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttgcaattaccaata-cttaaaacaaggagccagtacacatcaacagccaagatagtagt 321
Query: 122 tgtctcagctttggaaaatcctaacacttgacaatcctaaacctgccttgacatcaagac 181
|||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 322 tgtctcagctttgggaaatcctaacacttgacaatcctaatcctgccttgacatcaagac 381
Query: 182 tccctgggcttggctggcggagatataaatatcaaagtgacaagacccaagatgactacc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tccctgggcttggctggcggagatataaatatcaaagtgacaagacccaagatgactacc 441
Query: 242 cggtgcttgtttataccatcacgcctgttctgtggacaggcaggaccttggtccaccaat 301
|||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 442 tggtgcttgataataccatcacgcctgttctgtggacaggcaggaccttggcccaccaat 501
Query: 302 gtggtccgcccccttcccttctggaaac 329
||||||||||||||||||||||||||||
Sbjct: 502 gtggtccgcccccttcccttctggaaac 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no464_m23.g1 MSMg01no464_m23.g1 CHROMAT_FILE:
MSMg01no464_m23.g1 PHD_FILE: MSMg01no464_m23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:42 2005
(473 letters)
>mm_chr10_83151361_83152232
Length = 872
Score = 818 bits (423), Expect = 0.0
Identities = 450/459 (98%), Gaps = 2/459 (0%)
Strand = Plus / Minus
Query: 1 tcaggtctgatgctctagctacatatgttgacagtgctgcagagacccatcaaaaagaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 458 tcaggtctgatgctctagctacatatgttgacagtgctgcagagacccatc-aaaagaga 400
Query: 61 caggatcccatgagcacagctcgttcacatgacacgtctcctggcttataatgtacgctg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 caggatcccatgagcacagctcgttcacatgacacgtctcctggcttataatgtacgctt 340
Query: 121 gtacacttgacaaaacacagagtagggttgtgacaaacccaaagagttttgaaaactctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gtacacttgacaaaacacagagtagggttgtgacaaacccaaagagttttgaaaactctg 280
Query: 181 tatcaaaccttgtcctagactatgagaatccttcaaaatgacaatctgcacaccctgcca 240
| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 279 tgtcaaaccttgtcctagactatgagaatccttcaaaatgacaatctgcataccctgcca 220
Query: 241 atgtaaccgcatatgtcagggattccccagggtgagaagaagaagcctcattgacaaagg 300
| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 acgtaaccacagatgtcagggattccccagggtgagaagaagaagcctcattgacaaagg 160
Query: 301 gagtccgccattttacaccgaactcaggacaaagtttcactgcaatgagtcagtgctctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 gagtccgccattttacaccgaactcaggacaaagtttcactgcaatgagtcagtgctctg 100
Query: 361 actggaggcctctgtcttctgctactctatcaatactgggtcctcaccgggactcc-ttt 419
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 99 actggaggcctctggcttctgctactctatcaatactgggtcctcaccgggactcctttt 40
Query: 420 ggatatcctgttgttgccctgtgtcatggagttcctgta 458
|||||||||||||||||||||||||||||||||||||||
Sbjct: 39 ggatatcctgttgttgccctgtgtcatggagttcctgta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 872
Length adjustment: 10
Effective length of query: 463
Effective length of database: 862
Effective search space: 399106
Effective search space used: 399106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
