Query= MSMg01no466_k05.b1 MSMg01no466_k05.b1 CHROMAT_FILE:
MSMg01no466_k05.b1 PHD_FILE: MSMg01no466_k05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:12 2005
(446 letters)
>mm_chr10_58110994_58111839
Length = 846
Score = 764 bits (395), Expect = 0.0
Identities = 431/447 (96%), Gaps = 8/447 (1%)
Strand = Plus / Minus
Query: 1 cattcctgggtgactagtttgtgacaagctggcatatgagcaaactatcctgaagcacct 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 cattcccgggtgactagtttgtgacaagctggcatatgagcaaactatcctgaagcacct 598
Query: 61 gctatcttttcttcctctccacaccagcaccacagggaggcagctagcactcctgcttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gctatcttttcttcctctccacaccagcaccacagggaggcagctagcactcctgcttct 538
Query: 121 gtgtggcagtgtccccagtccccagtcccactcacctttctacaacccagccttcttcat 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 gtgtggcagt-------gtccccagtcccactcacctttctacaacccagccttcttcat 485
Query: 181 ctcggctttccatccagtctgggagcacaggaacagccgctgagttagaaagcacataac 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ctcggctttccatccggtctgggagcacaggaacagccgctgagttagaaagcacataac 425
Query: 241 tgtggggtaacagagcggtcctttggctgattctctcagtaaagttttgcaaagatcttc 300
|||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 424 tgtgctgtgacagagcggtcctttggctgtttctctcagtaaagttttgcaaagatcttc 365
Query: 301 acggaataacctagacctcagaggcactcatgggctggtaaaatgccagagcttctagat 360
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 acggaataacctagacttcagaggcactcatgggctggtaaaatgccagagcttctagat 305
Query: 361 ttagcccaatatcctcagtgtgcatagagatgaagaacttgaagacctgggtgaagtg-t 419
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct: 304 ttagcccaatatcctcagtgtgcatacagatgaagaacttgaagacctgggtgaagtgtt 245
Query: 420 ttttcccatcctggtacagaattcttc 446
|||||||||||||||||||||||||||
Sbjct: 244 ttttcccatcctggtacagaattcttc 218
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no466_k05.g1 MSMg01no466_k05.g1 CHROMAT_FILE:
MSMg01no466_k05.g1 PHD_FILE: MSMg01no466_k05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:12 2005
(388 letters)
>mm_chr10_57919557_57920344
Length = 788
Score = 750 bits (388), Expect = 0.0
Identities = 388/388 (100%)
Strand = Plus / Plus
Query: 1 tctgaaaattcatttagacatgtgtgggaaaaagtataaagggcaaaacatttcttgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgaaaattcatttagacatgtgtgggaaaaagtataaagggcaaaacatttcttgttt 260
Query: 61 cttactattattacaaaaattgttttaacctcaaggaattccctaagagatctttgagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttactattattacaaaaattgttttaacctcaaggaattccctaagagatctttgagaa 320
Query: 121 cccatagaaattctcagacattatttggtagaaagtctcttgctctcatttcttgagata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccatagaaattctcagacattatttggtagaaagtctcttgctctcatttcttgagata 380
Query: 181 agctgctttaaaataatccttcacacagtgtgaaacttgcagggattggtcactactaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agctgctttaaaataatccttcacacagtgtgaaacttgcagggattggtcactactaga 440
Query: 241 ttttaaaaatgttagttaaaatataaactaaaaatttctgaactatgtcttattctcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttaaaaatgttagttaaaatataaactaaaaatttctgaactatgtcttattctcatt 500
Query: 301 taatattggatattcacattttatcaataatttgatttgcttttttttgtgtgtgtaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taatattggatattcacattttatcaataatttgatttgcttttttttgtgtgtgtaagt 560
Query: 361 aatagctattttggagtaggatatcctt 388
||||||||||||||||||||||||||||
Sbjct: 561 aatagctattttggagtaggatatcctt 588
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 788
Length adjustment: 9
Effective length of query: 379
Effective length of database: 779
Effective search space: 295241
Effective search space used: 295241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
