Query= MSMg01no466_l19.b1 MSMg01no466_l19.b1 CHROMAT_FILE:
MSMg01no466_l19.b1 PHD_FILE: MSMg01no466_l19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:20 2005
(186 letters)
>mm_chr10_115593752_115594337
Length = 586
Score = 329 bits (170), Expect = 7e-95
Identities = 182/186 (97%)
Strand = Plus / Plus
Query: 1 cacaaaagactaccatctgatgccacaggcaatgactggacatgcaataccaggaagtgc 60
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 cacaaaagactaccatctgatgccacaggcaatgactggacacacaataccaggaagtgc 260
Query: 61 cccaaacacaagaaactagaagacagaagacatatggtgctgatacagcttttcaaccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 261 cccaaacacaagaaactagaagacagaagacatatggtgctgatacagcttctcgaccca 320
Query: 121 tttctgattaaattctccatttcccttccctagaaacaaagggatgcatacctgtggtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttctgattaaattctccatttcccttccctagaaacaaagggatgcatacctgtggtca 380
Query: 181 ggggtg 186
||||||
Sbjct: 381 ggggtg 386
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 186
Length of database: 586
Length adjustment: 8
Effective length of query: 178
Effective length of database: 578
Effective search space: 102884
Effective search space used: 102884
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no466_l19.g1 MSMg01no466_l19.g1 CHROMAT_FILE:
MSMg01no466_l19.g1 PHD_FILE: MSMg01no466_l19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:20 2005
(207 letters)
>mm_chr10_115840698_115841303
Length = 606
Score = 385 bits (199), Expect = e-111
Identities = 205/207 (99%), Gaps = 1/207 (0%)
Strand = Plus / Minus
Query: 1 acagactctgaaatgaagagggaacagatgagctataaatgtgtgaataaagtcttccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 acagactctgaaatgaagagggaacagatgagctataaatgtgtgaataaagtcttccaa 347
Query: 61 gccccacagagggaaaaaaaatgtttaaaaggagatctgcagatatgtttactttgagct 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gccccacagaggg-aaaaaaatgtttaaaaggagatctgcagatatgtttactttgagct 288
Query: 121 tgagggttagtggaagaaatgaagaaagacacttggtgacatcatttctctccagggtaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 287 tgagggttagtggaagaaatgaagaaagacacttggtgacatcatttctcaccagggtaa 228
Query: 181 gtggggtgcagtgttttgtgtgtgttc 207
|||||||||||||||||||||||||||
Sbjct: 227 gtggggtgcagtgttttgtgtgtgttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 207
Length of database: 606
Length adjustment: 9
Effective length of query: 198
Effective length of database: 597
Effective search space: 118206
Effective search space used: 118206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
