Query= MSMg01no467_d07.b1 MSMg01no467_d07.b1 CHROMAT_FILE:
MSMg01no467_d07.b1 PHD_FILE: MSMg01no467_d07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:00 2005
(439 letters)
>mm_chr10_72926071_72926910
Length = 840
Score = 758 bits (392), Expect = 0.0
Identities = 428/440 (97%), Gaps = 1/440 (0%)
Strand = Plus / Plus
Query: 1 attttttatataatgtattctggttagctttaccctgtacaactcttcccagatacaccc 60
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 atttttcatataatgtattctggttagctttaccctctacaactcttcccagatacaccc 260
Query: 61 catcttct-ccccccaccctacttatccccatgtctcttttatatctctgtcttcaaaag 119
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 catcttctcccccccaccctacttatccccatatctcttttatatctctgtcttcaaaag 320
Query: 120 tgaaaacaatcatcagggaaatgcaaatcaaaacaaccctgagattccacttcactccag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaaaacaatcatcagggaaatgcaaatcaaaacaaccctgagattccacttcactccag 380
Query: 180 tcagaatggctaagatcaaaaattcaggtgacagcagatgctggtgtggatgtggagaaa 239
|||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 381 tcagaatgcctaagatcaaaaattcaggtgacagcagatgctggcgaggatgtggagaaa 440
Query: 240 gaggaattcttctccattgttggtgggattgcaggcttgtacaaccactctggaaatcag 299
|||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaggaacactcctccattgttggtgggattgcaggcttgtacaaccactctggaaatcag 500
Query: 300 tctggtggttccttagaaaattggacatagtactactggaggatcccacaatacctctcc 359
||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 tctggcggttccttagaaaattggacatagtactaccggaggatcccacaatacctctcc 560
Query: 360 tgggcatatatccagaagatgtcccaaccagtaagaaggacacatgctccactatgttca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgggcatatatccagaagatgtcccaaccagtaagaaggacacatgctccactatgttca 620
Query: 420 tagcagccttatttataata 439
||||||||||||||||||||
Sbjct: 621 tagcagccttatttataata 640
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 840
Length adjustment: 9
Effective length of query: 430
Effective length of database: 831
Effective search space: 357330
Effective search space used: 357330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no467_d07.g1 MSMg01no467_d07.g1 CHROMAT_FILE:
MSMg01no467_d07.g1 PHD_FILE: MSMg01no467_d07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:00 2005
(495 letters)
>mm_chr10_73098658_73099553
Length = 896
Score = 855 bits (442), Expect = 0.0
Identities = 479/496 (96%), Gaps = 9/496 (1%)
Strand = Plus / Minus
Query: 5 cacattgtctatgagatgatgaaaatataaaaccaaccataactttggtcaaaagaggac 64
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 cacattgtctatgagatgacgaaaatataaaaccaaccataactttggtcaaaagaggac 637
Query: 65 agaggtttcatgggcattcatattttttgtagaataaataatgagctttgttaatatttc 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 636 agaggtttcatgggtattcatattttttgtagaataaataatgagctttgttaatatatc 577
Query: 125 ataaagcatgtaaaatgaactaaacattggacaactacagggctagtgaactaactctac 184
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ataaagaatataaaatgaactaaacattggacaactacagggctagtgaactaactctac 517
Query: 185 atcctcaggaattttatgattacaaagtagctctgaaggaatgctgattcattctgcatt 244
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 atcttcaggaattttatgattacaaagtagctctgaaggaatgctgattcattctgcatt 457
Query: 245 ac-----tttctggttttttttttaaggtttgattataattcttaaaaagaaaattcatc 299
|| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 acagctgttt----ttttttttttaaggtttgattataattcttaaaaagaaaattcatc 401
Query: 300 cttattgtttatattatgctttgaattgcaagatttcataaagtatggtacaatccccat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cttattgtttatattatgctttgaattgcaagatttcataaagtatggtacaatccccat 341
Query: 360 agaatccaagtctaaatcaagtctaaatgatttttattagtgtacaactaaacaaaaatt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 340 agaatccaagtctaaatcaagtctaaatgatttttattagtgtacaactaaacaaaattt 281
Query: 420 ttttcaggccatatggtatttcttggggaattggtcatttgcatttattttggatttact 479
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ttttcagaccatatggtatttcttggggaattggtcatttgcatttattttggatttact 221
Query: 480 atgttccctgggagaa 495
||||||||||||||||
Sbjct: 220 atgttccctgggagaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 896
Length adjustment: 10
Effective length of query: 485
Effective length of database: 886
Effective search space: 429710
Effective search space used: 429710
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
