Query= MSMg01no467_i09.b1 MSMg01no467_i09.b1 CHROMAT_FILE:
MSMg01no467_i09.b1 PHD_FILE: MSMg01no467_i09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:25 2005
(481 letters)
>mm_chr10_129603399_129604279
Length = 881
Score = 824 bits (426), Expect = 0.0
Identities = 468/482 (97%), Gaps = 2/482 (0%)
Strand = Plus / Plus
Query: 1 tttttcagaggaaaataaaggtgaatttctgaatgatgttctgtcaaagctgagctaatt 60
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 201 tttttcagaggaaaataaaggtgaatttctgaatgatgttctgtccaagttgagctaatt 260
Query: 61 cagggaattgtgttatgaagtcacacaaatgtgcctgaagaaagcaatgcagactccccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagggaattgtgttatgaagtcacacaaatgtgcctgaagaaagcaatgcagactccccc 320
Query: 121 tgtatcctaagattcttgcccacttataaggaatgtagattagctatcatgcatatatta 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |
Sbjct: 321 tgtatcctaagattcttgcccacttataaggaatgtagattaactatcatgcatagataa 380
Query: 181 ttaaaggccctaaccatctggcatctccaataagtctgtcaaagcataaggcatagttat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaaaggccctaaccatctggcatctccaataagtctgtcaaagcataaggcatagttat 440
Query: 241 tc-tngatggctttggatttggaataacagggtaatattgtcaaacagttacaatactaa 299
|| | || ||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 tcat-gagggctttggacttggaataacagggtaatattgtcaaacagttacaatagtaa 499
Query: 300 gatttctctcaccttctgggagacaactctccagagagaggagaaattacgtcaattctc 359
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 500 gatttctctcaccttctgggagacaactctccagagagaggagaaattaggtcaattctc 559
Query: 360 aagacatctgtgtgttccagaacaaagtccaagtaaagtacagagggtcagatttagtaa 419
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 560 aagacatctgtgtgttccagaataaagtccaagtaaagtacagagggtcagatttagtaa 619
Query: 420 gacaaaacttgtatcagatgtaaaatataggattttatctttccttctctgaatcctttt 479
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 620 gacaaaacttgtatcagatgtaaaatacaggattttatctttccttctctgaatcctttt 679
Query: 480 ag 481
||
Sbjct: 680 ag 681
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space: 410241
Effective search space used: 410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no467_i09.g1 MSMg01no467_i09.g1 CHROMAT_FILE:
MSMg01no467_i09.g1 PHD_FILE: MSMg01no467_i09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:25 2005
(497 letters)
>mm_chr10_129816585_129817478
Length = 894
Score = 915 bits (473), Expect = 0.0
Identities = 490/497 (98%), Gaps = 3/497 (0%)
Strand = Plus / Minus
Query: 1 attattttcatttatctttaacagttatagctcttatcctgttcagggacttaagcattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 attattttcatttatctttaacagttatagctcttatcctgttcagggacttaagcattt 635
Query: 61 ctttagagctacaataataataaggtcacaattcttaaaatacattgcttaccttgatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 ctttagagctacaataataataaggtcacaattcttaaaatacattgcttaccttgatgc 575
Query: 121 atatttctgttttagaaaaatggagttaattaatttttttgccttctcaaaactaaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 atatttctgttttagaaaaatggagttaattaatttttttgccttctcaaaactaaacaa 515
Query: 181 aaggttagaatgactgtctggatgtttgaaataaatcaggactgaatctccacttgcatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 aaggttagaatgactgtctggatgtttgaaataaatcaggactgaatctccacttgcatc 455
Query: 241 catgtctgatcttcatgccagctccacagacagcacagtctgcctgtctcctaggatgtc 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 catgtcagatcttcatgccagctccacagacagcacagtctgcctgtctcctaggatgtc 395
Query: 301 tgcactaaccaagaacacaaatgagactcctgccccattatacatgctatctgggaccca 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tgcactaaccaagaacacaaatgagactcctgccccattatacatgctatctgggacccg 335
Query: 361 cccccccccccaagcccagcaggtgtgggatatctctctgcctgagccccatcagccttc 420
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 cccccccc---aagcccagcaggtgtgggatatctctctgcctgagccccatcagccttc 278
Query: 421 ccttctgcaccctaaacggatcagtgttcttgcccaacccccaacagcctgcctatctcc 480
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 277 ccttctgcaccctaaacggatcagtgttcttgcccaacccccaacagtctgcctgtctcc 218
Query: 481 taggcagtcttctctaa 497
|||||||||||||||||
Sbjct: 217 taggcagtcttctctaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 894
Length adjustment: 10
Effective length of query: 487
Effective length of database: 884
Effective search space: 430508
Effective search space used: 430508
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
