Query= MSMg01no467_n23.b1 MSMg01no467_n23.b1 CHROMAT_FILE:
MSMg01no467_n23.b1 PHD_FILE: MSMg01no467_n23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:52 2005
(503 letters)
>mm_chr10_33570126_33571028
Length = 903
Score = 942 bits (487), Expect = 0.0
Identities = 496/499 (99%)
Strand = Plus / Plus
Query: 5 gaattcatgaattctttttctcaggaaagttataaaaccaaatatctctctattgctgca 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgaattcattttctcaggaaagttataaaaccaaatatctctctattgctgca 264
Query: 65 ggctggttttgtaatggaagaaacaggcaacaagaatgtcagaagaggggcatgggatag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggctggttttgtaatggaagaaacaggcaacaagaatgtcagaagaggggcatgggatag 324
Query: 125 tgaagataaaaccttgagaaattcagtcaccctcccactcccagacaggtttaaacagga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgaagataaaaccttgagaaattcagtcaccctcccactcccagacaggtttaaacagga 384
Query: 185 ttactttttatccaaggaagtcatcaaattaatttagccgtcacttcaaatacatcttaa 244
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttacattttatccaaggaagtcatcaaattaatttagccgtcacttcaaatacatcttaa 444
Query: 245 ctttttgcttataattttttgtaacagagtaaataggtaccttgttttcctgcagctctt 304
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctttttgcttataaatttttgtaacagagtaaataggtaccttgttttcctgcagctctt 504
Query: 305 tgtagttcctccttaaataaaactctttcgaaagtcttataataatacgatagattttta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtagttcctccttaaataaaactctttcgaaagtcttataataatacgatagattttta 564
Query: 365 caaaagccaacttttacacaacttacctaggctgaacttctaaagtccttccaagtacat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 caaaagccaacttttacacaacttacctaggctgaacttctaaagtccttccaagtacat 624
Query: 425 ttctcaaccaaaacaaactctgtaggggctatttgtacctcagcaacccttcagtccttg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttctcaaccaaaacaaactctgtaggggctatttgtacctcagcaacccttcagtccttg 684
Query: 485 ctcttcttaacactgtagc 503
|||||||||||||||||||
Sbjct: 685 ctcttcttaacactgtagc 703
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no467_n23.g1 MSMg01no467_n23.g1 CHROMAT_FILE:
MSMg01no467_n23.g1 PHD_FILE: MSMg01no467_n23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:52 2005
(323 letters)
>mm_chr10_33737357_33738078
Length = 722
Score = 576 bits (298), Expect = e-169
Identities = 317/324 (97%), Gaps = 3/324 (0%)
Strand = Plus / Minus
Query: 1 ttgtcagatgtacaagtgcataaggagcctgagtgagccagggtaacaaatgacgactta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ttgtcagatgtacaagtgcataaggagcctgagtgagccagggtaacaaatgacgactta 379
Query: 61 cgattattttgatgcactcacctattccatagcaacccgctgagcctgcttgtaattcct 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 378 cgattattttgatgcactcacctattccatagcaacctgctgagcctgcttgtaattcct 319
Query: 121 ttctgcatccatacacatttttgcaataaaaa-aatcttgattaattgttcttagggatt 179
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 318 ttctgcatccatacacatttttgcaataaaaacaatcttgattaattgttcttagggatt 259
Query: 180 ttgtattgctcttggtaatttttttttttttttgaaaccttttagggaaaaggtaggact 239
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ttgtattgctcttggta--ttttttttttttttgaaaccttttagggaaaaggtaggact 201
Query: 240 ttttcgtttttggagacagggtttttctgtatagccctggctgtcctggaactcactttg 299
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 200 ttttggtttttggagacagggtttttctgtatagccttggctgtcctggaactcactttg 141
Query: 300 tagaccaggctggccttgagctca 323
||||||||| ||||||||||||||
Sbjct: 140 tagaccaggttggccttgagctca 117
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 722
Length adjustment: 9
Effective length of query: 314
Effective length of database: 713
Effective search space: 223882
Effective search space used: 223882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
