Query= MSMg01no468_j15.b1 MSMg01no468_j15.b1 CHROMAT_FILE:
MSMg01no468_j15.b1 PHD_FILE: MSMg01no468_j15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:53 2005
(504 letters)
>mm_chr10_69388147_69389052
Length = 906
Score = 917 bits (474), Expect = 0.0
Identities = 498/508 (98%), Gaps = 6/508 (1%)
Strand = Plus / Minus
Query: 1 gccgtccacaccagccccaatccacaccagcctggtatggatctaaacccgtccctagtc 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 706 gccgtccacaccagccccaatccacaccagcctggtatggatccaaacccgtccctagtc 647
Query: 61 agatcttcttcaccagggctgcagcgtttccctcagcatctccaagctgtcgaaggcaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 agatcttcttcaccagggctgcagcgtttccctcagcatctccaagctgtcgaaggcaac 587
Query: 121 tgagcagctgtacatcattcctcacttttttaactccgaaga-ttaaaaaaaaaaaaaaa 179
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 586 tgagcagctgtacatcattcctcacttttttaactccgaagatttaaaaaaaaaaaaaaa 527
Query: 180 ctctgaccgaaacatgcgaaaaattttgtgtggcaacacttaatagcgacgaacatcctt 239
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ctcagaccgaaacatgcgaaaaattttgtgtggcaacacttaatagcgacgaacatcctt 467
Query: 240 ctgaccgtnct---catatatcctttcaaagtgcctcctgattggattaaggacgctctg 296
||||||| || || | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 ctgaccg--ctcaacagacatcctttcaaagtgcctcctgattggattaaggacgctctg 409
Query: 297 gcaagcctcttgcaggacccaatagtgacataaaagcaaacccaggagttatttgtatgt 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gcaagcctcttgcaggacccaatagtgacataaaagcaaacccaggagttatttgtatgt 349
Query: 357 aaatatgaggactgcctgggtgtagactttcagtaacttgataccagggcagtcagagta 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 aaatatgaggactgcctgggtgtagactttcagtaacttgataccagggcagtcagagta 289
Query: 417 gcagggaccctcacaagtccagagagccccgggcacttgtgtaactgggcgatttggaga 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gcagggaccctcacaagtccagagagccccgggcacttgtgtaactgggcgatttggaga 229
Query: 477 cgggctcttctcaaaagtgaatgaagaa 504
||||||||||||||||||||||||||||
Sbjct: 228 cgggctcttctcaaaagtgaatgaagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 906
Length adjustment: 10
Effective length of query: 494
Effective length of database: 896
Effective search space: 442624
Effective search space used: 442624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no468_j15.g1 MSMg01no468_j15.g1 CHROMAT_FILE:
MSMg01no468_j15.g1 PHD_FILE: MSMg01no468_j15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:53 2005
(518 letters)
>mm_chr10_69212628_69213545
Length = 918
Score = 934 bits (483), Expect = 0.0
Identities = 509/518 (98%)
Strand = Plus / Plus
Query: 1 cctgcttcaaaactataaaaatgtttatctttattttctgtgtgcctgctttctggtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgcttcaaaactataaaaatgtttatctttattttctgtgtgcctgctttctggtttt 260
Query: 61 attttgtgccgaattttaaaaaattagttgtggtgctgtgtgaatgcttgatatgtgtac 120
|||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 attttgtgccaaattttaaaaaattagttgtggtgttgtgtgaatgcttgatatgtgtac 320
Query: 121 acacacatgccatagtgcatatgtataggttaagtgataattttcaggagtcctttctct 180
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 acacacaagccatagtgcatatgtataggttaagtgataattttcaggagtcatttctct 380
Query: 181 cttgtatatggaccccaggaatcaaactcaggtctgtaggattagattgtaagtgacctt 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 cttgtatatggaccccaggaatcaaactcaggtctgtaggatcagattgtaagtgacctt 440
Query: 241 acccactgggctatctcgccaaccctcatatagcttcatatgtctcaagggcagccacag 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acccactgggctatcttgccaaccctcatatagcttcatatgtctcaagggcagccacag 500
Query: 301 atagtcacaggctccagtcacaatcatggtaaatgagtccccttatcctgttgatttcaa 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 atagtcacaggctccagtcacaatcatggtaaatgagtccccttatcctgctgatttcaa 560
Query: 361 ataccatctctcttacctattaaactctcaatgtattattttaattattcctgaactagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ataccatctctcttacctattaaactctcaatgtattattttaattattcctgaactagt 620
Query: 421 gattagatttttctggcatttccccccaaatcagttcatgtgatactatatttctcanaa 480
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 621 gattagatttttctggcatttccccccaaatcagttcatctgatactatatttctcaaaa 680
Query: 481 catctccccataaacattatgaagggggtgaaagtcat 518
||||||||||||||||||||||||||||||||||||||
Sbjct: 681 catctccccataaacattatgaagggggtgaaagtcat 718
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space: 461264
Effective search space used: 461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
