Query= MSMg01no468_l07.b1 MSMg01no468_l07.b1 CHROMAT_FILE:
MSMg01no468_l07.b1 PHD_FILE: MSMg01no468_l07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:01 2005
(124 letters)
>mm_chr10_111668982_111669505
Length = 524
Score = 240 bits (124), Expect = 2e-68
Identities = 124/124 (100%)
Strand = Plus / Minus
Query: 1 acagaggagatgaagaaggaaacatcagtctgccttcactaacatggatgatcctcacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acagaggagatgaagaaggaaacatcagtctgccttcactaacatggatgatcctcacat 265
Query: 61 gtgcgagaatcacaagtgcacatatgcatgcacatatgtgtgagtacacatgtatatgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtgcgagaatcacaagtgcacatatgcatgcacatatgtgtgagtacacatgtatatgta 205
Query: 121 aaat 124
||||
Sbjct: 204 aaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 124
Length of database: 524
Length adjustment: 8
Effective length of query: 116
Effective length of database: 516
Effective search space: 59856
Effective search space used: 59856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no468_l07.g1 MSMg01no468_l07.g1 CHROMAT_FILE:
MSMg01no468_l07.g1 PHD_FILE: MSMg01no468_l07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:01 2005
(255 letters)
>mm_chr10_111622219_111622873
Length = 655
Score = 373 bits (193), Expect = e-108
Identities = 239/265 (90%), Gaps = 17/265 (6%)
Strand = Plus / Minus
Query: 1 cttcagtaataaacatcaatgtggaagtgtaagcc-----------------aaaaaacc 43
||||||||||||||| ||||||||||||||||||| |||||| |
Sbjct: 569 cttcagtaataaacagcaatgtggaagtgtaagccaaaaaaaaaaaaaaaaaaaaaaaac 510
Query: 44 cctttccactccaacttgcgttggccattttgttttattactgcaatggtacccctaact 103
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 509 cctttccactccaacttgcgttggccattttgttttataactgcaatggtacccctaaca 450
Query: 104 agtactgtgtccatggcaaggtgcatcatgtgacttccatataagagtatgaagttaaat 163
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 449 agtactgtgtccatggcaaggtgcatcatgtgacttccatttaagagtatgaagttaaat 390
Query: 164 tagtgcacagcagcatagatttctaaggaaaaggccatcaaaagagacaatacttcaaaa 223
||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 389 tagtgcacagcagcataaatttctaaagaaaaggccatcaaaagagacaataattcaaaa 330
Query: 224 gaaaagaggcaccaggaggacctgg 248
|||||||||||||||||| ||||||
Sbjct: 329 gaaaagaggcaccaggagaacctgg 305
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 255
Length of database: 655
Length adjustment: 9
Effective length of query: 246
Effective length of database: 646
Effective search space: 158916
Effective search space used: 158916
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
