Query= MSMg01no469_g14.b1 MSMg01no469_g14.b1 CHROMAT_FILE:
MSMg01no469_g14.b1 PHD_FILE: MSMg01no469_g14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:59 2005
(244 letters)
>mm_chr10_94874797_94875439
Length = 643
Score = 439 bits (227), Expect = e-128
Identities = 244/259 (94%), Gaps = 15/259 (5%)
Strand = Plus / Minus
Query: 1 ctcagtctaacttaaaggtgtgaagatgtagctaggtattttaaagttccccttaggtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ctcagtctaacttaaaggtgtgaagatgtagctaggtattttaaagttccccttaggtag 285
Query: 61 ttttagctgaatgatgctttctttcctatggctgctcaagatcaaatggcccttttaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ttttagctgaatgatgctttctttcctatggctgctcaagatcaaatggcccttttaaat 225
Query: 121 gaaacaaaacaaaacaaaa---------------acaaaatgtcccaaggaaaggcaaga 165
||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 224 gaaacaaaacaaaacaaaacaaaacaaaacaaaaacaaaatgtcccaaggaaaggcaaga 165
Query: 166 gaatattcctgtcagaatgacttgcctttgttttttgggttcctatgcactgggtcaaaa 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 gaatattcctgtcagaatgacttgcctttgttttttgggttcctatgcactgggtcaaaa 105
Query: 226 gtccaagctccataggaga 244
|||||||||||||||||||
Sbjct: 104 gtccaagctccataggaga 86
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 643
Length adjustment: 9
Effective length of query: 235
Effective length of database: 634
Effective search space: 148990
Effective search space used: 148990
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no469_g14.g1 MSMg01no469_g14.g1 CHROMAT_FILE:
MSMg01no469_g14.g1 PHD_FILE: MSMg01no469_g14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:59 2005
(467 letters)
>mm_chr10_94678499_94679365
Length = 867
Score = 804 bits (416), Expect = 0.0
Identities = 454/467 (97%)
Strand = Plus / Plus
Query: 1 gacattgtaaaaattgctagtgtgtaactttaaacttctctaagtgacaatatcaatgat 60
|||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||| |
Sbjct: 201 gacattgtaaaaattgctagtgtgtaactttaaactcccctaagagacaatatcaatggt 260
Query: 61 gggcaactttttactacttaactcatttctactatttaactcttcaaactagtcattgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggcaactttttactacttaactcatttctactatttaactcttcaaactagtcattgca 320
Query: 121 ggtgttagctggaattctcaggtgtaaatgatttaacacagaaagcagtgatatgtgaat 180
||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 ggtgttagctggaattctcgggtgtaaatgatttaacacagaaagcagtgagatgtgaat 380
Query: 181 ccttcccatagagaggtccagccaaggccatggtatgaattagggaggagcctccattat 240
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 381 ccttcccatagagaggtccagccaaggccatggtatgaaatagggaggagcctccagcat 440
Query: 241 tcnctcgcctcctttctgcaagtttctctttccttttctccccatgatttctaaggccca 300
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctctcgcctcctttctgcaagtttctctttccttttctccccatgatttctaaggccca 500
Query: 301 ggtccctgaattctgtattttatcttgagtgacaccaggctacccctcttgagtctttca 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 501 ggtccctgaattctgtattttatcttgagtgacaccaggctaccccccttgagtctttca 560
Query: 361 ctgtgacaccaggctacccctccggcagtccgttcttcaaataggaactattctctaagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgtgacaccaggctacccctccggcagtccgttcttcaaataggaactattctctaagc 620
Query: 421 ttttccagggaagcatatagtgagaaatgttttgaaaaactgtgcca 467
||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 621 ttttccagggaagcatagagtgagaaatgttttgaaaaactgtgcca 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
