Query= MSMg01no469_i14.b1 MSMg01no469_i14.b1 CHROMAT_FILE:
MSMg01no469_i14.b1 PHD_FILE: MSMg01no469_i14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:09 2005
(606 letters)
>mm_chr10_102971612_102972619
Length = 1008
Score = 783 bits (405), Expect = 0.0
Identities = 451/467 (96%), Gaps = 2/467 (0%)
Strand = Plus / Minus
Query: 1 tggcataatgacacaagtaagtataatattgaagatttgagggagaaagtactatttacc 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 467 tggcataatgacacaagtaagtataatattgaatatttgagggagaaagtactatttacc 408
Query: 61 tggaatggcttgaagtttgagacatgtaatggactataatgtaatagataagcagctgtc 120
|||||||||||||||||||| || | |||||||||||||||||||||||||||||||| |
Sbjct: 407 tggaatggcttgaagtttgatacgtataatggactataatgtaatagataagcagctgcc 348
Query: 121 acacaagcctatgcctttagtatctcacacttctactgattgttcccactgaatctggaa 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 347 acacaagcctatgcctttagtatctcacacttctactgattcttcccactgaatctggaa 288
Query: 181 tgggctgtgtgtctttcctcctactcctctccttcttctccatcc--ccatccgccatct 238
|||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |
Sbjct: 287 agggctgtgtgtctttcctcctactcctctccttcttctccatccctccatcctccattt 228
Query: 239 ggttttgtgcatataaagcaagaactatatgcagccctagctggcctgaaagttgctatg 298
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 gtttttgtgcatataaagcaagaactatatgcagccctagctggcctgaaagttgctatg 168
Query: 299 tataccaggctgggctgaaactctcagagatctacctgtagtgattaaaccattcacccc 358
|||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |
Sbjct: 167 tataccaggctgggctgaaactctcagagatctacctgcagtgattaagccattcaccac 108
Query: 359 catgcttacttgttctttcctttaaaaaaaatatgtggcttggccctaaacagaacttga 418
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 catgcttacctgttctttcctttaaaaaaaatatgtggcttggccctaaacagaacttga 48
Query: 419 gtgcaaattctgtaggcagtcccacaacacccagaggatgatccatt 465
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 gtgcaaattctgtaggcagtcccacaacacccagaggatgatccatt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1008
Length adjustment: 10
Effective length of query: 596
Effective length of database: 998
Effective search space: 594808
Effective search space used: 594808
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no469_i14.g1 MSMg01no469_i14.g1 CHROMAT_FILE:
MSMg01no469_i14.g1 PHD_FILE: MSMg01no469_i14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:09 2005
(448 letters)
>mm_chr10_102846054_102846905
Length = 852
Score = 803 bits (415), Expect = 0.0
Identities = 443/455 (97%), Gaps = 8/455 (1%)
Strand = Plus / Plus
Query: 1 agaaggctatatttatatttgcatgagctcatgcacacctccccccgcacccctcccccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 agaaggctatatttatatttgcatgagctcatgcacacctccccccgcacccctcccccc 258
Query: 61 aacaaactcacaattatcaatcagacagaaggaagctattctattaacctgagaggggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aacaaactcacaattatcaatcagacagaaggaagctattctattaacctgagaggggac 318
Query: 121 aggcatgggagaggttggaggaaagaaatggagacataaaattgttgcagtt-cattttc 179
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 319 aggcatgggagaggttggaggaaagaaatggagacataaaattgttgcaatttcattttc 378
Query: 180 aattaaaatatattaaaaaaa-tactagagccaagtcttaaaaataattttcacaggttt 238
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aattaaaatatattaaaaaaaatactagagccaagtcttaaaaataattttcacaggttt 438
Query: 239 tctctagtgaaacttaaatacaaaaaaatactcgctttaaaaatgagaagtaacttgcat 298
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gctctagtgaatcttaaatacaaaaaaatactcgctttaaaaatgagaagtaacttgcat 498
Query: 299 acgtttatcaaggtat-----aaaacactgtctggaaaaaaattgataagtagtcttgta 353
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 499 acgtttatcaaggtattttataaaacactgtctggaaaaaa-ttgataagtagtcttgta 557
Query: 354 aatgtaatgatgggccaagttgataaactggaaaatccaaactttctgttgtcattgtta 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aatgtaatgatgggccaagttgataaactggaaaatccaaactttctgttgtcattgtta 617
Query: 414 ccaaatgaatttatgtaattgatgcgatactgttt 448
|||||||||||||||||||||||| ||||||||||
Sbjct: 618 ccaaatgaatttatgtaattgatgtgatactgttt 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 852
Length adjustment: 10
Effective length of query: 438
Effective length of database: 842
Effective search space: 368796
Effective search space used: 368796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
