Query= MSMg01no470_h03.b1 MSMg01no470_h03.b1 CHROMAT_FILE:
MSMg01no470_h03.b1 PHD_FILE: MSMg01no470_h03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:21 2005
(232 letters)
>mm_chr10_75419070_75419702
Length = 633
Score = 368 bits (190), Expect = e-106
Identities = 222/233 (95%), Gaps = 1/233 (0%)
Strand = Plus / Plus
Query: 1 tctgcctccagggngctgggatcaaaggtgtgcgccaaaacacccatcttatacccagtt 60
||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 201 tctgcctccagggtgctgggatcaaaggtgtgcgccaaaacacccagcttatacccagct 260
Query: 61 tttgtttgttttaaaataaaaacaatcgtacactgttggtaattaccaaatgctttaaca 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 tttgtttgttttaaaataaaaacaatcgtacactgttgttaattaccaaatgctttaaca 320
Query: 121 ttcagtgtatgtcttacttagggtttttttttttt-aataaacaaatcttttttatttat 179
|||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 321 ttcagtgtatgtcttagttagggtttttttttttttaataaataaatcttttttatttat 380
Query: 180 ttattttttttaaaaagacttatttatttatttatttatttacttatttattt 232
|||||||| | ||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 381 ttatttttgtaaaaaagatttatttatttatttatttatttatttatttattt 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 633
Length adjustment: 9
Effective length of query: 223
Effective length of database: 624
Effective search space: 139152
Effective search space used: 139152
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no470_h03.g1 MSMg01no470_h03.g1 CHROMAT_FILE:
MSMg01no470_h03.g1 PHD_FILE: MSMg01no470_h03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:21 2005
(170 letters)
>mm_chr10_75600536_75601105
Length = 570
Score = 313 bits (162), Expect = 3e-90
Identities = 168/170 (98%)
Strand = Plus / Minus
Query: 1 taaaactctgaccttcacagatgcaccttattatctatagaaaaaaactacagtgagttc 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 370 taaaactctgaccttcacagatgcaccttattatctatagagaaaaactacagtgagttc 311
Query: 61 caaagtgctgggcaattgtgcttgctttattgataaatgataagatccacagaaatgcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 caaagtgctgggcaattgtgcttgctttattgataaatgataagatccacagaaatgcct 251
Query: 121 gagaaatggtatatgctgagatataaagcacgtggactgagagatgttag 170
|||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gagaaatggtgtatgctgagatataaagcacgtggactgagagatgttag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 170
Length of database: 570
Length adjustment: 8
Effective length of query: 162
Effective length of database: 562
Effective search space: 91044
Effective search space used: 91044
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
