Query= MSMg01no471_a05.b1 MSMg01no471_a05.b1 CHROMAT_FILE:
MSMg01no471_a05.b1 PHD_FILE: MSMg01no471_a05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:07 2005
(661 letters)
>mm_chr10_57730191_57731251
Length = 1061
Score = 1247 bits (645), Expect = 0.0
Identities = 654/657 (99%)
Strand = Plus / Plus
Query: 5 gaattctttgtttcgctatgaaccccatttttcctggggttatttgaatttctggagtcc 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgtttagctatgaaccccatttttcctggggttatttgaatttctggagtcc 264
Query: 65 agcttcttgagctctttgtatatattggatattagtcccctatcagatttaggattggta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agcttcttgagctctttgtatatattggatattagtcccctatcagatttaggattggta 324
Query: 125 aaaatcctttcccaatctgttggtggcctttttgtcttattgacagtgtcttttgcctta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaaatcctttcccaatctgttggtggcctttttgtcttattgacagtgtcttttgcctta 384
Query: 185 cagaagctttgcaattttatgaggtcccatttgtcaattcttgatcttacagcacaaacc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cagaagctttgcaattttatgaggtcccatttgtcaattcttgatcttacagcacaaacc 444
Query: 245 attgctattctgtttaggaacttttcccctggcaccattttttctaacctcctaaagaca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 attgctattctgtttaggaacttttcccctggcaccattttttctaacctcctaaagaca 504
Query: 305 attacatcatttcaaaacaggtactaactgaacgcttggatgctcttcttctggaaaaag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 attacatcatttcaaaacaggtactaactgaacgcttggatgctcttcttctggaaaaag 564
Query: 365 cagagactgaacaacagtgtctatgtctgaaaaaagaaaatgttaaaatgaagcaagagg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cagagactgaacaacagtgtctatgtctgaaaaaagaaaatgttaaaatgaagcaagagg 624
Query: 425 ttgaggtaagacaatatttagtgttcttttatccgttaacttacacaaaataataatgaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttgaggtaagacaatatttagtgttcttttatccgttaacttacacaaaataataatgaa 684
Query: 485 ttttacagctgaatagaatcttaagcatctaatctagccaagcatggatacacatgccag 544
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttttacagctgaatagaatcttaagcatctaatctagccaagcatggatacacatgccaa 744
Query: 545 cacttgggaggctcaggcaggaagatgtcaaagtcaaggccagcctgggatacttaacaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 745 cacttgggaggctcaggcaggaagatgtcaaagtcaaggccagcctgggatgcttaacaa 804
Query: 605 ggtacttactgtttctaataaaaggagccaacaagatgactcagtagatagaggtgc 661
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ggtacttactgtttctaataaaaggagccaacaagatgactcagtagatagaggtgc 861
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space: 684201
Effective search space used: 684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no471_a05.g1 MSMg01no471_a05.g1 CHROMAT_FILE:
MSMg01no471_a05.g1 PHD_FILE: MSMg01no471_a05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:07 2005
(576 letters)
>mm_chr10_57909260_57910235
Length = 976
Score = 1007 bits (521), Expect = 0.0
Identities = 540/551 (98%), Gaps = 8/551 (1%)
Strand = Plus / Minus
Query: 34 cggggcacagcactagaagacttaaattatgggccttccgtgtcgtttatgctgacgcgc 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976 cggggcacagcactagaagacttaaattatgggccttccgtgtcgtttatgctgacgcgc 917
Query: 94 ccttccttcccgccctgcttcgtccgtggagccacccacacaaccgtgcaagcccaccgc 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 ccttccttcccgccctgcttcgtccgtggagccacccacacaaccgtgcaagcccaccgc 857
Query: 154 cgcgcggtgtcagcctccccccgagacacggcagccgtgacagggcctagctatccggga 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 cgcgcggtgtcagcctccccccgagacacggcagccgtgacagggcctagctatccggga 797
Query: 214 gaccgacgacgc--------cgggcgggcgaaccccgcagagcgccccacgacggcctac 265
|||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 gaccgacgacgccgggcgggcgggcgggcgaaccccgcagagcgccccacgacggcctac 737
Query: 266 ggagcggaggccgaggaagccaggcccaagtgggcccgcggatagccatgaagaggaaac 325
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 736 ggagcggaggccgaagaagccaggcccgagtgggcccgcggatagccatgaagaggaaac 677
Query: 326 gctggcggccgcagtccccacgcctccggtgctcagcagcgccacgccgcccgcgaccgc 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gctggcggccgcagtccccacgcctccggtgctcagcagcgccacgccgcccgcgaccgc 617
Query: 386 ctccactccagcggggagccgaggccgccgggagccatgacaccggcgccaccgccaccg 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ctccactccagcggggagccgaggccgccgggagccatgacaccggcgccaccgccaccg 557
Query: 446 gaccagacccgcttacctctcggggcgacggggcggagccctgcaccgaggcgatgtacc 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gaccagacccgcttacctctcggggcgacggggcggagccctgcaccgaggcgatgtacc 497
Query: 506 gctccacgtcggccttgctacgcctcatcgcgccgcggaccaagctccccaggagcggca 565
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 496 gctccacgtcggccttgctacgcctcatcgcgccgcggaccaggctccccaggagcggca 437
Query: 566 gaccagccctg 576
|||||||||||
Sbjct: 436 gaccagccctg 426
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space: 546756
Effective search space used: 546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
