Query= MSMg01no471_j12.b1 MSMg01no471_j12.b1 CHROMAT_FILE:
MSMg01no471_j12.b1 PHD_FILE: MSMg01no471_j12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:53 2005
(421 letters)
>mm_chr10_76199449_76200269
Length = 821
Score = 716 bits (370), Expect = 0.0
Identities = 410/424 (96%), Gaps = 4/424 (0%)
Strand = Plus / Plus
Query: 1 tcacggaggcctggaaggcaacatcacccggggcagccacagctgcgactgatgggggcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcacggaggcctggaaggcaacatcacccggggcagccacagctgcgactgatgggggcg 260
Query: 61 tgattgtggtgacaaatccccttgagtcatgaaactggatgcacattgtcatccatgctc 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgattgtggtgacaagtccccttgagtcatgaaactggatgcacattgtcatccatgctc 320
Query: 121 caaagctctctgaaatcaaactgagaaatcttcaagttctcctaaaagcaggggtgtgct 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 321 caaagctctctgaaatcaaactgagaaatcttcaagctctcctaaaagcaggg-tgtgct 379
Query: 181 cctacccaca-gtactgcagtgatccgaatggaagattaacaggctcagtctattaccca 239
||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 380 cctacccacgtgtactgcagtgatctgaatggaagactaacaggctcagtctattaccca 439
Query: 240 atctacaaaacataaccataggctaccaactgtcttaccaatggtttttatggtaaaaga 299
||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 440 atctacataacataaccataggctgccaactgtcttaccaatggtttttatggtaaaaga 499
Query: 300 gaaaacacgtttaatctcagc--tggagaagtggaatcattactactgaggtgtagcatt 357
||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 500 gaaaacacgtttaatctcagcgctggagaagtggaatctttactactgaggtgtagcatt 559
Query: 358 attcttggagagagatgaataaatgtctactcacctcagataggggactggtgacagacc 417
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 560 attcttggagagagatgaatgaatgtctactcaccccagataggggactggtgacagacc 619
Query: 418 acca 421
||||
Sbjct: 620 acca 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 821
Length adjustment: 9
Effective length of query: 412
Effective length of database: 812
Effective search space: 334544
Effective search space used: 334544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no471_j12.g1 MSMg01no471_j12.g1 CHROMAT_FILE:
MSMg01no471_j12.g1 PHD_FILE: MSMg01no471_j12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:53 2005
(230 letters)
>mm_chr10_76387427_76388056
Length = 630
Score = 420 bits (217), Expect = e-122
Identities = 226/229 (98%)
Strand = Plus / Minus
Query: 1 tgtcctcattttccatccatactgtaattcaaatgtccttgtttacatttcccctgcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tgtcctcattttccatccatactgtaattcaaatgtccttgtttacatttcccctgcagt 370
Query: 61 tctttaagtcttattatctcaccttagggcctctgccttcccagtatctcactttaggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tctttaagtcttattatctcaccttagggcctctgccttcccagtatctcactttaggtc 310
Query: 121 cagagtgaagattgcctaagtagtctcaattacgggggtggggggggtgggggtttttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 309 cagagtgaagattgcctaagtagtctcaattacgggggtggggggggtggggggcattta 250
Query: 181 tagacctagtttttcacccctggagttcctgttccttgtcatttcctgt 229
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tagacctagtttttcacccctggagttcctgttccttgtcatttcctgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 630
Length adjustment: 9
Effective length of query: 221
Effective length of database: 621
Effective search space: 137241
Effective search space used: 137241
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
