Query= MSMg01no472_d24.b1 MSMg01no472_d24.b1 CHROMAT_FILE:
MSMg01no472_d24.b1 PHD_FILE: MSMg01no472_d24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:49 2005
(520 letters)
>mm_chr10_92227211_92228130
Length = 920
Score = 752 bits (389), Expect = 0.0
Identities = 405/411 (98%), Gaps = 2/411 (0%)
Strand = Plus / Minus
Query: 5 gaattccatatcttcttctgccctcttgtgttggtaagcacccacactcacacagtcaca 64
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gaatcccatatcttcttctgccctcttgtgttggtaagcacccacactcacacagtcaca 350
Query: 65 taaataaaaataaaatcttgtttagtttttgaagaaatagtcagtctatacttgaacagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 taaataaaaataaaatcttgtttagtttttgaagaaatagtcagtctatacttgaacagg 290
Query: 125 agaacatggtgggtaggagagacagctctggcatcaggtggttggaattagacttgcaga 184
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 289 agaacatggtgggtaggagagacagctctgacatcaggtggttggaattagacttgcaga 230
Query: 185 tttcctacttaacatacaaatgagctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 244
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 229 tttcctacttaacatacaaatgagc--tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 172
Query: 245 gtacgtgcacatacttatgtgagcatatagatagtttagagaaagataataggttgtctt 304
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 171 gtacgtgcacatacttatgtgagcatatagagaggttagagaaagataataggttgtctt 112
Query: 305 cctcagttgctctccaccttattttttgaaacacttactgaaccttggccattgggtttc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 cctcagttgctctccaccttattttttgaaacacttactgaaccttggccattgggtttc 52
Query: 365 aaggctctgcctttctctgcttgcctctcacttgggatatagacctatacg 415
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 aaggctctgcctttctctgcttgcctctcacttgggatatagacctatacg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space: 464100
Effective search space used: 464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no472_d24.g1 MSMg01no472_d24.g1 CHROMAT_FILE:
MSMg01no472_d24.g1 PHD_FILE: MSMg01no472_d24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:49 2005
(489 letters)
>mm_chr10_92031464_92032352
Length = 889
Score = 946 bits (489), Expect = 0.0
Identities = 489/489 (100%)
Strand = Plus / Plus
Query: 1 tttatactaaaaccttggagtaagcaaaaatggaaaataggccacaagtcccttctttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttatactaaaaccttggagtaagcaaaaatggaaaataggccacaagtcccttctttgg 260
Query: 61 gctgcaggaggcactgctgagtgggctgtaatagtcaactctttggctcttttggcagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgcaggaggcactgctgagtgggctgtaatagtcaactctttggctcttttggcagca 320
Query: 121 gtgggctttggcaattactaagctttgagttaaactttgacagtttagcaggatttgctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgggctttggcaattactaagctttgagttaaactttgacagtttagcaggatttgctt 380
Query: 181 aagagctgtgtgccaaggaacccattccttctccagttaacagttgacttctgcatagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagagctgtgtgccaaggaacccattccttctccagttaacagttgacttctgcatagaa 440
Query: 241 tcccatcatgaaacaattggattgtacaaaacaaaaacaaaaaaaggaaaatactaaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcccatcatgaaacaattggattgtacaaaacaaaaacaaaaaaaggaaaatactaaata 500
Query: 301 tgaaatactatgaaaaaactaaattttatttagaaagaaaaagtggtacacaagatgaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgaaatactatgaaaaaactaaattttatttagaaagaaaaagtggtacacaagatgaaa 560
Query: 361 ataaatgttggtctcaaatataatcttttgggtattatgaaaggaatcgggcttaatctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ataaatgttggtctcaaatataatcttttgggtattatgaaaggaatcgggcttaatctt 620
Query: 421 tcaaataacactgattaggcaaaaatgatagagcgcgaatgtcaaagggactctagggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcaaataacactgattaggcaaaaatgatagagcgcgaatgtcaaagggactctagggaa 680
Query: 481 taactggga 489
|||||||||
Sbjct: 681 taactggga 689
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 889
Length adjustment: 10
Effective length of query: 479
Effective length of database: 879
Effective search space: 421041
Effective search space used: 421041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
