Query= MSMg01no472_l22.b1 MSMg01no472_l22.b1 CHROMAT_FILE:
MSMg01no472_l22.b1 PHD_FILE: MSMg01no472_l22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:29 2005
(434 letters)
>mm_chr10_35520801_35521635
Length = 835
Score = 688 bits (356), Expect = 0.0
Identities = 414/438 (94%), Gaps = 14/438 (3%)
Strand = Plus / Plus
Query: 1 ttggaacagttaagttgaatgccgttgagttcagtagagtcaatgcagtcctatttagtt 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 208 ttggaacagttaagttgaatgcagttgagttcagtagagtcaatgcagtcctatttagtt 267
Query: 61 atatttagttatatattttgtgcagtcagtgcagtcagtgtagttcagtccatggaactc 120
|||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ctattcagtt--------tgtgcagtcagtgcagtcagtgtagttcagtccatggaactc 319
Query: 121 agaggcagtttttttcaagtagtacagttcagtttaaagccaagaagaaccttattgaat 180
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 320 agaggcagtgtttttcaagtagtacagttcagtttaaagccaagaagagccttattgaat 379
Query: 181 cattcagctcaaagaggg-ttttgagcagaaaacaagtgatttgaaccagccagccagaa 239
|||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 380 cattcagctcaaagaggggtttt-agcagaaaacaagtgattttaaccagccagccagaa 438
Query: 240 ttcagaaagatatagaatggttaatttcattcagaagtaaacctctgataggacaattat 299
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ttcagaaagatatagaaaggttaatttcattcagaagtaaacctctgataggacaattat 498
Query: 300 atctcaggaaaaa-ggttacttttacagagaaaaataagacaaatattcattatgtagaa 358
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 atctcaggaaaaaaggttacttttacagagaaaaataagacaaatattcattatgtagaa 558
Query: 359 gtttgtatcccaaatgaaa-aatgtatcacaaagtgtctgacttgttatatgctcccggt 417
||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 559 gtttgtatcacaaatgaaagaatgtatcacaaagtgtctgacttgttgtatgctccctgt 618
Query: 418 ttactga-tggaagaaca 434
||||||| || |||||||
Sbjct: 619 ttactgactg-aagaaca 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 835
Length adjustment: 9
Effective length of query: 425
Effective length of database: 826
Effective search space: 351050
Effective search space used: 351050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no472_l22.g1 MSMg01no472_l22.g1 CHROMAT_FILE:
MSMg01no472_l22.g1 PHD_FILE: MSMg01no472_l22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:29 2005
(473 letters)
>mm_chr10_35668041_35668913
Length = 873
Score = 814 bits (421), Expect = 0.0
Identities = 460/473 (97%)
Strand = Plus / Minus
Query: 1 caactatagcgattaaaagtatgtgctaagggcatgtctgcattctagttggatcacaaa 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 789 caactatagcgattaaaagtatgtgctaagggcatgtctgcgttctagttggatcacaaa 730
Query: 61 gacctaggagggctttgaatgtgatcagatcagccatgtaaatggattaaaattcccttt 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 729 gacctaggagggctttgaatgtgatcagatcagccatgtaaatgaattaaaatccccttt 670
Query: 121 caattattgtttgatttcagagatacaaatattttaaagaatgaattttaaatagcacaa 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 669 caattattgtttgatttcagagatacaaatatttcaaagaatgaattttaaatagcacaa 610
Query: 181 caaaggatgcctgtaatgtagaatttacttgtattgatatatgtttggtgattacctcca 240
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 caaagtatgcctataatgtagaatttacttgtattgatatatgtttggtgattacctcca 550
Query: 241 cctattctttgtaacaaatgttgttttatcttcttaaagagaaaaatgatgtcatcagga 300
||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 cctattcaatgaaacaaatgttgttttatcttcttaaagagaaaaatgatgtcatcagga 490
Query: 301 aatgagtaaagctcatgtcattcttatttttgtgaatccatgctaaggtcaaattacaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 aatgagtaaagctcatgtcattcttatttttgtgaatccatgctaaggtcaaattacaaa 430
Query: 361 agtctgctattgagttaaaattctaccaaagccttttaaggagaaaatgttttgtgagca 420
| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 429 actttgctattgagttaaaattctaccaaagccttttaaggagaaaatgttttgtgagaa 370
Query: 421 ttttgctttttagtccttaaccagtgactctgctagaaacacacagaataaac 473
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ctttgctttttagtccttaaccagtgactctgctagaaacacacagaataaac 317
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
