Query= MSMg01no472_n20.b1 MSMg01no472_n20.b1 CHROMAT_FILE:
MSMg01no472_n20.b1 PHD_FILE: MSMg01no472_n20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:38 2005
(507 letters)
>mm_chr10_99160089_99160996
Length = 908
Score = 975 bits (504), Expect = 0.0
Identities = 507/508 (99%), Gaps = 1/508 (0%)
Strand = Plus / Minus
Query: 1 cgaagtggcaagagttgcaaattaaataagctctgtgtttggagtttttcctttagtgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 cgaagtggcaagagttgcaaattaaataagctctgtgtttggagtttttcctttagtgtg 649
Query: 61 ctgctgagacttgcccgtggcttcagggaacttcatgattaagttggaacgaagatctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 ctgctgagacttgcccgtggcttcagggaacttcatgattaagttggaacgaagatctca 589
Query: 121 tgcctcctgtttaatgtagcagaggcaaggttattaaatatttcttggcaattaattgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 tgcctcctgtttaatgtagcagaggcaaggttattaaatatttcttggcaattaattgct 529
Query: 181 tgagctacgcccttttttcacagcttcggtttcggctgtgcaggaaaggagaaaacattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 tgagctacgcccttttttcacagcttcggtttcggctgtgcaggaaaggagaaaacattt 469
Query: 241 aattgcccctaatttgttgctgtagttcaaccataagcctgagcattgtactgaggccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 aattgcccctaatttgttgctgtagttcaaccataagcctgagcattgtactgaggccag 409
Query: 301 tggagaatttttaaggggcttcacagcgacattccccgaggaagaattagttttcatttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 tggagaatttttaaggggcttcacagcgacattccccgaggaagaattagttttcatttt 349
Query: 361 atgcaacaatcagacagcctctttgatccatgactttctttgaaattaaggaaattacga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 atgcaacaatcagacagcctctttgatccatgactttctttgaaattaaggaaattacga 289
Query: 421 gaagctgccaatatgtagcaaactcagtgctgtttgg-aaaaaaaaaaaaaaaacccgtc 479
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 288 gaagctgccaatatgtagcaaactcagtgctgtttggaaaaaaaaaaaaaaaaacccgtc 229
Query: 480 ctcctgctctattgtctttgcacagtct 507
||||||||||||||||||||||||||||
Sbjct: 228 ctcctgctctattgtctttgcacagtct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 908
Length adjustment: 10
Effective length of query: 497
Effective length of database: 898
Effective search space: 446306
Effective search space used: 446306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no472_n20.g1 MSMg01no472_n20.g1 CHROMAT_FILE:
MSMg01no472_n20.g1 PHD_FILE: MSMg01no472_n20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:39 2005
(478 letters)
>mm_chr10_98993430_98994307
Length = 878
Score = 924 bits (478), Expect = 0.0
Identities = 478/478 (100%)
Strand = Plus / Plus
Query: 1 tttatatatggtgactggatagactatatttctttatatcagatagccagatagaaaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttatatatggtgactggatagactatatttctttatatcagatagccagatagaaaata 260
Query: 61 tatcgctttaagaacatacagattaatggggtgtatatcttctgaataaaaacatctctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatcgctttaagaacatacagattaatggggtgtatatcttctgaataaaaacatctctc 320
Query: 121 atgactacactgacattttttggatagatttttcacccagtgtgtattctgagtggaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgactacactgacattttttggatagatttttcacccagtgtgtattctgagtggaaaa 380
Query: 181 tttgatttaggaatcttctttgagcatgatgatgcaattttatggtttatctatttggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttgatttaggaatcttctttgagcatgatgatgcaattttatggtttatctatttggac 440
Query: 241 agctagactccagctgagcctgaggcttctagactacaaaaagcatccagttgggcagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agctagactccagctgagcctgaggcttctagactacaaaaagcatccagttgggcagca 500
Query: 301 gcttaaaacaatatgtgatactcaagagacttggagtgatttattggatatgctcagtga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcttaaaacaatatgtgatactcaagagacttggagtgatttattggatatgctcagtga 560
Query: 361 attaagaaatgagaatttcttgtcttgactactctagtttatcttggatattagccaagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 attaagaaatgagaatttcttgtcttgactactctagtttatcttggatattagccaagt 620
Query: 421 ttctgtctatctgtctgtctctctgtctctgtctctcccctcacttggtaatgtctgt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttctgtctatctgtctgtctctctgtctctgtctctcccctcacttggtaatgtctgt 678
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space: 406224
Effective search space used: 406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
