Query= MSMg01no473_n15.b1 MSMg01no473_n15.b1 CHROMAT_FILE:
MSMg01no473_n15.b1 PHD_FILE: MSMg01no473_n15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:06 2005
(259 letters)
>mm_chr10_39073017_39073675
Length = 659
Score = 255 bits (132), Expect = 1e-72
Identities = 171/186 (91%), Gaps = 4/186 (2%)
Strand = Plus / Minus
Query: 74 aaatctgctttgaaaaagaaaagggttccttttagaattaccactttatggttcccaaat 133
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 442 aaatctgttttgaaaaagaaaagggttccttttagaattaccactttatggttccccaat 383
Query: 134 taattgagaggttttagtcatcatttcttagttaattcattcagtgaacacccactgaac 193
||||||||||||| |||||||| ||||||| |||||| ||||||||||||||||||||||
Sbjct: 382 taattgagaggttgtagtcatcgtttcttaattaattaattcagtgaacacccactgaac 323
Query: 194 atcccttaacacaagcagtgaagggagagttctaggtgtgtctcatcta----ggggtac 249
| ||||||||||||||||||| |||||||||||||| |||||||||| | |||||||
Sbjct: 322 accccttaacacaagcagtgaggggagagttctaggggtgtctcatccacagtggggtac 263
Query: 250 ctgggt 255
| ||||
Sbjct: 262 ccgggt 257
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 259
Length of database: 659
Length adjustment: 9
Effective length of query: 250
Effective length of database: 650
Effective search space: 162500
Effective search space used: 162500
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no473_n15.g1 MSMg01no473_n15.g1 CHROMAT_FILE:
MSMg01no473_n15.g1 PHD_FILE: MSMg01no473_n15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:06 2005
(175 letters)
>mm_chr10_39231888_39232462
Length = 575
Score = 310 bits (160), Expect = 4e-89
Identities = 166/168 (98%)
Strand = Plus / Minus
Query: 1 tcagagcagtgacaagaggtctcctgctcccgagaagccaggcatttggttcttggatag 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 317 tcagagcagtgacaagaggtctcctgctcctgagaagccaggcatttggttcttggatag 258
Query: 61 tcaacttgggcctaaagttgaccaaaacttctctgttaaaatgagtcaactgaagcatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tcaacttgggcctaaagttgaccaaaacttctctgttaaaatgagtcaactgaagcatgt 198
Query: 121 atatgtatatgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgt 168
|||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 197 atatgtatatgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 150
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 175
Length of database: 575
Length adjustment: 8
Effective length of query: 167
Effective length of database: 567
Effective search space: 94689
Effective search space used: 94689
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
