Query= MSMg01no473_o19.b1 MSMg01no473_o19.b1 CHROMAT_FILE:
MSMg01no473_o19.b1 PHD_FILE: MSMg01no473_o19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:12 2005
(481 letters)
>mm_chr10_98081825_98082704
Length = 880
Score = 789 bits (408), Expect = 0.0
Identities = 417/420 (99%), Gaps = 1/420 (0%)
Strand = Plus / Minus
Query: 62 ccttagtgatcagggaaatgaaaatcataataaccctgagattctaccttacaccaatca 121
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 880 ccttagtgatcagggaaatgaaaatcataataaccctgagattctaccttacatcaatca 821
Query: 122 gaacggctaagataaaaaactcaggtgacagcacatgtcggcaaggatgtggagaaagga 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 gaacggctaagataaaaaactcaggtgacagcacatgtcggcaaggatgtggagaaagga 761
Query: 182 acacattgctggtgggactgcaaactggtacaaccattctggaactcaatctggcggtcc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 acacattgctggtgggactgcaaactggtacaaccattctggaactcaatctggcggtcc 701
Query: 242 ctcagaaaaaaggaaatagcgaggagtatttttttttaatataatctctagtgggctagt 301
||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 700 ctcagaaaaaaggaaatagtgaggagtatttttttttaa-ataatctctagtgggctagt 642
Query: 302 acatctacctaccatttattcaggaagttgttaccattcaacatcttcacttcaatgtct 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 acatctacctaccatttattcaggaagttgttaccattcaacatcttcacttcaatgtct 582
Query: 362 tttaaaacatatttttgtttccttccttccctgggacaaaaaacgtagggaaaggggata 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 tttaaaacatatttttgtttccttccttccctgggacaaaaaacgtagggaaaggggata 522
Query: 422 gtgctgaaatcaaattagtgttttgatattcacccaatattccttatgttgctgaagaga 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gtgctgaaatcaaattagtgttttgatattcacccaatattccttatgttgctgaagaga 462
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 880
Length adjustment: 10
Effective length of query: 471
Effective length of database: 870
Effective search space: 409770
Effective search space used: 409770
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no473_o19.g1 MSMg01no473_o19.g1 CHROMAT_FILE:
MSMg01no473_o19.g1 PHD_FILE: MSMg01no473_o19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:12 2005
(482 letters)
>mm_chr10_97853540_97854421
Length = 882
Score = 924 bits (478), Expect = 0.0
Identities = 481/482 (99%)
Strand = Plus / Plus
Query: 1 ccctacattggggcatagagccttcataagaccaaggcctctcctcccattgatgaccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccctacattggggcatagagccttcataagaccaaggcctctcctcccattgatgaccaa 260
Query: 61 ctaggccatcttctgctacatatgcagctggagccatgagtcccacatgtgtactctttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaggccatcttctgctacatatgcagctggagccatgagtcccacatgtgtactctttg 320
Query: 121 gttggtgatttagtccctgggagctctaggggtactggttagttcatattgttgttcctc 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttggtgatttagtccctgggaactctaggggtactggttagttcatattgttgttcctc 380
Query: 181 ttatgggactgcaaatcccttcagttccctgggtcctttctttagctcctccattgggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttatgggactgcaaatcccttcagttccctgggtcctttctttagctcctccattgggga 440
Query: 241 ccctgtgttcagtccaatcataggctgccaggatccacctttgtatttgtcaggcactgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccctgtgttcagtccaatcataggctgccaggatccacctttgtatttgtcaggcactgg 500
Query: 301 tggagcctctccggcgacagctataacaggcttctgacagtaagcacttgttggcatcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggagcctctccggcgacagctataacaggcttctgacagtaagcacttgttggcatcca 560
Query: 361 caaaagtggatttggcaaaatccagtttggcaaaagtatgtgcttaacttaattgatcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caaaagtggatttggcaaaatccagtttggcaaaagtatgtgcttaacttaattgatcct 620
Query: 421 agcatcttcagtcacactacaaataaaggctaatggtgcataaacttaaacttttgagtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agcatcttcagtcacactacaaataaaggctaatggtgcataaacttaaacttttgagtt 680
Query: 481 ct 482
||
Sbjct: 681 ct 682
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space: 411584
Effective search space used: 411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
