Query= MSMg01no474_g10.b1 MSMg01no474_g10.b1 CHROMAT_FILE:
MSMg01no474_g10.b1 PHD_FILE: MSMg01no474_g10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:51 2005
(239 letters)
>mm_chr10_76890237_76890875
Length = 639
Score = 460 bits (238), Expect = e-134
Identities = 238/238 (100%)
Strand = Plus / Minus
Query: 1 tgggctgatgtatgtatgtatgggactccaacagatatgcacagactgtaaatgctctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tgggctgatgtatgtatgtatgggactccaacagatatgcacagactgtaaatgctctca 379
Query: 61 tctctctggaatgtggccctggaaccagtgagacagagggaagctggccctgatcctggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tctctctggaatgtggccctggaaccagtgagacagagggaagctggccctgatcctggg 319
Query: 121 cctgcacgggctgtggctctctaaatcctctcccaggcaggcctggttgtcctctcctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 cctgcacgggctgtggctctctaaatcctctcccaggcaggcctggttgtcctctcctca 259
Query: 181 ccatggggacatctgggggctctcccctactcccacctgcgatctgacagtgcaagtg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ccatggggacatctgggggctctcccctactcccacctgcgatctgacagtgcaagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no474_g10.g1 MSMg01no474_g10.g1 CHROMAT_FILE:
MSMg01no474_g10.g1 PHD_FILE: MSMg01no474_g10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:51 2005
(463 letters)
>mm_chr10_76714599_76715463
Length = 865
Score = 843 bits (436), Expect = 0.0
Identities = 455/462 (98%), Gaps = 2/462 (0%)
Strand = Plus / Plus
Query: 1 cacataaaagccccaaacttcaacatgtgaatcctggtaactgactcggtaaatagaaaa 60
|||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 cacacaaaagccccaaacttcaacatgtgaatcctggtaactgactcagtaaatagaaaa 260
Query: 61 gtcgggctgggatgtgcatgtctgtgccccaagacaccagttcccagtgtctggactcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcgggctgggatgtgcatgtctgtgccccaagacaccagttcccagtgtctggactcct 320
Query: 121 ggtctgtggccagcctattgctcccaccatctggctccctttggtggcctctatgtgcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 ggtctgtggccagcctattgctcccaccatctggctccctttggtggcctctatgggcag 380
Query: 181 cggttcaactcttgacctacttcataactgtggtgtggtctcaagggctatcatgcagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cggttcaactcttgacctacttcataactgtggtgtggtctcaagggctatcatgcagtt 440
Query: 241 cctaatatactttcccaccctctgccctggcccatggtggctaccagtttgcccctactg 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctaagatactttcccaccctctgccctggcccatggtggctaccagtttgcccctactg 500
Query: 301 tatacctctccgcccattctatagtccccgctgggtgtctatgcatgtggcttctacatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 501 tatacctctccgcccattctatagtccccgctgggtgtctatgcatgtggcttctacttc 560
Query: 361 gtcacatgactgcatagctgtccccaagcagggcagggagccagctcctttcg--gtgcc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 561 gtcacatgactgcatagctgtccccaagcagggcagggagccagctcctttcgcggtgcc 620
Query: 419 tctcccgacttgttcccacatccctatccctgcactacgggg 460
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctcccgacttgttcccacatccctatccctgcactacgggg 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 865
Length adjustment: 10
Effective length of query: 453
Effective length of database: 855
Effective search space: 387315
Effective search space used: 387315
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
