Query= MSMg01no474_h15.b1 MSMg01no474_h15.b1 CHROMAT_FILE:
MSMg01no474_h15.b1 PHD_FILE: MSMg01no474_h15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:57 2005
(615 letters)
>mm_chr10_63977154_63978169
Length = 1016
Score = 1077 bits (557), Expect = 0.0
Identities = 601/616 (97%), Gaps = 1/616 (0%)
Strand = Plus / Minus
Query: 1 ggcttaggctataccgtcattagtccaaagctggtgtgggctaaacagcatggttttgtc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 884 ggcttaggctataccgtcattagtccaaagctggtgtgggctaaacagcatggtttggtc 825
Query: 61 tcaaatactctatgctcatggataaattactactcttattttttaaaataattaatcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 tcaaatactctatgctcatggataaattactactcttattttttaaaataattaatcaag 765
Query: 121 agatgctaagcaaacttttcaaggctgataagtgaaaggtggcaatttccattgtgagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 agatgctaagcaaacttttcaaggctgataagtgaaaggtggcaatttccattgtgagat 705
Query: 181 tcctgagtaaactgttcttcattatattttatatatctagagcaaaggcgagg-agatga 239
||||||||||||| ||| ||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 704 tcctgagtaaactcttcatcattatattttatatatctagagcaaaggcgaggaaaatga 645
Query: 240 attgtgctctttctctgtgcttcgtcagcttttctccaatatgggtcaaatacctgtccc 299
||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 644 attgtgcacacactctgtgctttgtcagcttttctccaatatgggtcaaatacctgtccc 585
Query: 300 ctaaactgcatcagttctgattaaatagatgctcgtatattaatacattcctattttcac 359
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 584 ctaaactgcatcagttctgattaaatagatgctcgtatactaatacattcctattttcac 525
Query: 360 tagagtattgtgacttagttataaacctccatggctcaggatgattaaagaattcctttc 419
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tagagtatcgtgacttagttataaacctccatggctcaggatgattaaagaattcctttc 465
Query: 420 atcataattcttagggcaccacttactctcagtgttctttattcagcccatcaatttaat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 atcataattcttagggcaccacttactctcagtgttctttattcagcccatcaatttaat 405
Query: 480 atttatagtctagaagtaacttctttgaggatagaaaagtaaacaaataacctttattta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 atttatagtctagaagtaacttctttgaggatagaaaagtaaacaaataacctttattta 345
Query: 540 aacatatcanattaatgaatatggataatgttattatttacatatatattaaaattatat 599
||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 344 aacatatcaaattaatgaatatggataaagttaatatttacatatatattaaaattatat 285
Query: 600 agatatagatctacca 615
||||||||||||||||
Sbjct: 284 agatatagatctacca 269
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1016
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1006
Effective search space: 608630
Effective search space used: 608630
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no474_h15.g1 MSMg01no474_h15.g1 CHROMAT_FILE:
MSMg01no474_h15.g1 PHD_FILE: MSMg01no474_h15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:57 2005
(572 letters)
>mm_chr10_63859447_63860413
Length = 967
Score = 932 bits (482), Expect = 0.0
Identities = 550/581 (94%), Gaps = 19/581 (3%)
Strand = Plus / Plus
Query: 1 atgtaatcatcatcataaattattcatgtttaagttggtgagtaggctacatatctgtaa 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 atgtaatcatcatcataaattattcatgtttaagttggtgagtaggcaacatatctgtaa 260
Query: 61 ctgactgctctctgtcataaatgggaactaacacacccctctttgcctcataaacattta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgactgctctctgtcataaatgggaactaacacacccctctttgcctcataaacattta 320
Query: 121 tactaataggtcaatgaaacaatttatttgaagtttaagttgtttataggaacagagagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tactaataggtcaatgaaacaatttatttgaagtttaagttgtttataggaacagagagt 380
Query: 181 tttattctatttttggagaattatctagntaattgccaacaaatatttctctttaccttg 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 tttattctatttttggagaattatctagttaattgccaacaaatatttctctttaccttg 440
Query: 241 ttttta----taagacttcctccatgcctatgctcttcacacgagcgagtatttgtaaaa 296
| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 -----aaaaataagacttcctccatgcctatgctcttcacaggagcgagtatttgtaaaa 495
Query: 297 gacagaatagctggcgtagcttcattgttcattgttctttgtgtggcctgtcctcaagga 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gacagaatagctggcgtagcttcattgttcattgttctttgtgtggcctgtcctcaagga 555
Query: 357 tgagctgagctgtcttctaaaaagctggccatttattttctactcg-tttcttcattcct 415
|||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 556 tgagctgagctgtcctctaaaaagctggccatttattttctaca-gatttcttcattcct 614
Query: 416 attgtttcccttatgtttattgcttaattcaataacagattaaaattattatgatacatt 475
|||||||||| || |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 615 attgtttccca-at---tattgcttaattcaataacagattgaaattattatgatacatt 670
Query: 476 catagtatatatatcatgctgtgaaatgtttaagactcatgatttttttaaaaatatatt 535
|||||||| ||| ||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 671 catagtatgtatgtcatgctgtgaaatgtttaagactcgtgatttttaaaaaaatatatt 730
Query: 536 ttgcttactgacttctgaacttat----ccctatggatgtt 572
|||||||||||||||||||||||| |||||||||||||
Sbjct: 731 ttgcttactgacttctgaacttatttatccctatggatgtt 771
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 967
Length adjustment: 10
Effective length of query: 562
Effective length of database: 957
Effective search space: 537834
Effective search space used: 537834
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
