Query= MSMg01no474_o10.b1 MSMg01no474_o10.b1 CHROMAT_FILE:
MSMg01no474_o10.b1 PHD_FILE: MSMg01no474_o10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:30 2005
(543 letters)
>mm_chr10_29405039_29405982
Length = 944
Score = 948 bits (490), Expect = 0.0
Identities = 528/544 (97%), Gaps = 9/544 (1%)
Strand = Plus / Minus
Query: 5 ggaattcattttttcccaaa----tacattaatcaaagccaaaaatttgacttccaggaa 60
|||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 744 ggaattcatttttt---aaaaaattacattaatcaaagccaaaaatttgacttccaggaa 688
Query: 61 tttaagatataataagactgtagatttctaatagtattgtgcttagtggaaaacagtttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tttaagatataataagactgtagatttctaatagtattgtgcttagtggaaaacagtttg 628
Query: 121 taattccatcaattttgcattttcataaagaattcaaatggtttttaaagtcagaaattg 180
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 627 taattccatcaatttttcatttccataaagaattcaaatggtttttaaagtcagaaattg 568
Query: 181 tgttcaaaatactatccagttgactcaaaataaaactcaacaaggaaaataattcaatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tgttcaaaatactatccagttgactcaaaataaaactcaacaaggaaaataattcaatac 508
Query: 241 catgatatcataagccaatcttagtgtagttaa-tgtattaccaaaggaatggttagtaa 299
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 507 catgatatcataagccaatcttagtgtagttaact-tattaccaaaggaatggttagtaa 449
Query: 300 aataatgtgttttgtcatactcaaagaaattttcttttggttttctaatagtgtagagat 359
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 aataatgcgttttgtcatactcaaagaaattttcttttggttttctaatagtgtagagat 389
Query: 360 aagccgtttctgcacacaaacatattattttatttttagcactaacagaagcacatgaat 419
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 388 aagccgtttctgcacacaaacatattattttatttttagcactaacagaaacacatgaat 329
Query: 420 gaaaagctttttgtcttcatgtgattgtttcattgtactacttgaaattttctttaaacc 479
|||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 328 gaaaaggtttttgtcttcatgtaattgtttcattgtactacttgaaattttgtttaaacc 269
Query: 480 tattgtagtgattccagaatgcttttatctttaaaagagttctttctccctcatttctcg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tattgtagtgattccagaatgcttttatctttaaaagagttctttctccctcatttctcg 209
Query: 540 tgag 543
||||
Sbjct: 208 tgag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 944
Length adjustment: 10
Effective length of query: 533
Effective length of database: 934
Effective search space: 497822
Effective search space used: 497822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no474_o10.g1 MSMg01no474_o10.g1 CHROMAT_FILE:
MSMg01no474_o10.g1 PHD_FILE: MSMg01no474_o10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:30 2005
(240 letters)
>mm_chr10_29245200_29245838
Length = 639
Score = 426 bits (220), Expect = e-124
Identities = 235/240 (97%), Gaps = 1/240 (0%)
Strand = Plus / Plus
Query: 1 ctggggctcttttaatctgtgcaggaaaggaggaacagacttgaggtagtgacaggtgtg 60
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 201 ctggggctcttttaatctgtgcaggaaaggaggagcagacctgaggtagtgacaggtgtg 260
Query: 61 ggttttgactcttgaagacagacaggtcgcttatggggactgtaacgtgcacagtacctc 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 g-ttttgactcttgaagacagacaggtcgcttatggggactgtaacgtgcacagtgcctc 319
Query: 121 cggcagtgcttatgatatattttcatctgtgcttgcttagggtgaataacctattgagaa 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 320 cggcagtgcttatgatatattttcatctgtgcatgcttagggtgaataacctattgagaa 379
Query: 181 gaaagttggtggaaaagcattgttttctgtggatttcctgctttctgtagcttatgattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gaaagttggtggaaaagcattgttttctgtggatttcctgctttctgtagcttatgattg 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 639
Length adjustment: 9
Effective length of query: 231
Effective length of database: 630
Effective search space: 145530
Effective search space used: 145530
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
