Query= MSMg01no475_a18.b1 MSMg01no475_a18.b1 CHROMAT_FILE:
MSMg01no475_a18.b1 PHD_FILE: MSMg01no475_a18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:42 2005
(533 letters)
>mm_chr10_87586997_87587927
Length = 931
Score = 969 bits (501), Expect = 0.0
Identities = 525/535 (98%), Gaps = 6/535 (1%)
Strand = Plus / Plus
Query: 1 attttctttctcattcttggtgttagtttcctttattgctaagtaaaacacttcttaaaa 60
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 attttctttctcattcttggt----gtttcctttattgctaagtaaaacacttcttaaaa 256
Query: 61 actaacttgatcatttccagttctg-aaaaaaaaaactgtttcttccagataacaataaa 119
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 257 actaacttgatcatttccagttctgaaaaaaaaaaactgtttcttccagataacaataaa 316
Query: 120 taataactatcttaactaaacaaactcaatttgaatatatctttggttttcatacacaca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 taataactatcttaactaaacaaactcaatttgaatatatctttggttttcatacacaca 376
Query: 180 agacagctatttcaaggacggtcatgtagttatgatttcttcatttt-gtactttatttc 238
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 377 agacagctatttcaaggacggtcatgtagttatgatttcttcattttggtactttatttc 436
Query: 239 ttctacctgtgctttgttccgatgcttggtgatttcagtattaccttcattcctacctct 298
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ttctacctgtgctttggtctgatgcttggtgatttcagtattaccttcattcctacctct 496
Query: 299 gaatctgtgaagttttaaagatagattaacagtaaacatttatgatttctaaattgttac 358
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 497 gaatctgtgaagttttaaagatagattaacagcaaacatttatgatttctaaattgttac 556
Query: 359 cttggatttggtatctttccaagaatttcatctagcttgtcaatgaaattaataaactcc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 cttggatttggtatctttccaagaatttcatctagcttgtcaatgaaattaataaactcc 616
Query: 419 gacaggccttttacatgcgcccacagaggatctgatggtgacggcgcatatccttttcct 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gacaggccttttacatgcgcccacagaggatctgatggtgacggcgcatatccttttcct 676
Query: 479 ccaagctccaatgtcctgataaatgacgtggccatctgtgaaggaaaatggacca 533
||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ccaagttccaatgtcctgataaatgacgtggccatctgtgaaggaaaatggacca 731
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 931
Length adjustment: 10
Effective length of query: 523
Effective length of database: 921
Effective search space: 481683
Effective search space used: 481683
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_a18.g1 MSMg01no475_a18.g1 CHROMAT_FILE:
MSMg01no475_a18.g1 PHD_FILE: MSMg01no475_a18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:42 2005
(283 letters)
>mm_chr10_87729316_87729998
Length = 683
Score = 513 bits (265), Expect = e-150
Identities = 277/281 (98%)
Strand = Plus / Minus
Query: 1 attgagcagtaatgaatggagtggccaatagcaaaggcttgaaagtggaattgtcttggg 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 attgagcagtaatgaatgcagtggccaatagcaaaggcttgaaagtggaattgtcttggg 422
Query: 61 ttcaaaatcttgctttggcagtcataggatcgttggtatggggtagttttccttaactaa 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 421 ttcaaaatcttgctttggcagtcataggatcgttggtatgggctagttttccttaactaa 362
Query: 121 ctatacctaaactttagttcatctgctcaaatgtgttttgtaaggatagtcttggtcaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctatacctaaactttagttcatctgctcaaatgtgttttgtaaggatagtcttggtcaga 302
Query: 181 cacttgacatgagagtgatgatacaccttgtgccctgtatcatagtatagctgacaacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cacttgacatgagagtgatgatacaccttgtgccctgtatcatagtatagctgacaacta 242
Query: 241 tatttattatgtgtggccttaaccccagagttatctggcag 281
|||||||||||||||| |||||||| |||||||||||||||
Sbjct: 241 tatttattatgtgtgggcttaacccaagagttatctggcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
