Query= MSMg01no475_f21.b1 MSMg01no475_f21.b1 CHROMAT_FILE:
MSMg01no475_f21.b1 PHD_FILE: MSMg01no475_f21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:07 2005
(402 letters)
>mm_chr10_18102831_18103631
Length = 801
Score = 688 bits (356), Expect = 0.0
Identities = 383/392 (97%), Gaps = 1/392 (0%)
Strand = Plus / Plus
Query: 10 ctttctctctctcccctaactctgaggtaagggaaagttaaagggaagtcctgtttatag 69
||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 210 ctttctctcactgccctaactctgaggtaaggaaaagttaaagggaagtcctgtttatag 269
Query: 70 cttttcatattcattgttcagacaaaaccataccaatttagagagagtaatcggttcttt 129
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 cttttcatattcgttgttcagacaaaaccataccaatttagagagagtaatcggttcttt 329
Query: 130 agggacgcacacggttgtgtaattagcacagtgagaaagctgtaagctatgctagtctgg 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 agggacgcacacggttgtgtaattagcacagtgagaaagctgtaagctatgctagtctgg 389
Query: 190 gatgcagttttcccaattcaggccaccaaaattattttcctagtcagtgtattccaagaa 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gatgcagttttcccaattcaggccaccaaaattattttcctagtcagtgtattccaagaa 449
Query: 250 attttgatgttcactaaggcaaacataaatgctgtgggtttttttcttttaaataaaaag 309
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 450 attttgatgttcactaaggcaaacataaatgctgtgggtttttt-cttttaaataaaaag 508
Query: 310 caggaatatgaaaactattgaaactgtgtgtatgtgcatgcatgcgcatgtgtgtgtagg 369
||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 509 caggaatatgaaaactattgaaactgtgtgtatgtgcgcgcgtgcgcatgtgtgtgtagg 568
Query: 370 tatgtgcgtgcataggtgtgtgtgtgtgtgtg 401
|||||| |||||||||||||||||||||||||
Sbjct: 569 tatgtgtgtgcataggtgtgtgtgtgtgtgtg 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 801
Length adjustment: 9
Effective length of query: 393
Effective length of database: 792
Effective search space: 311256
Effective search space used: 311256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_f21.g1 MSMg01no475_f21.g1 CHROMAT_FILE:
MSMg01no475_f21.g1 PHD_FILE: MSMg01no475_f21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:07 2005
(386 letters)
>mm_chr10_18231331_18232116
Length = 786
Score = 723 bits (374), Expect = 0.0
Identities = 383/386 (99%)
Strand = Plus / Minus
Query: 1 taatgaaatattgttgtttcacatgttgaaatatttcttatgggaatatacaatttttgc 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 586 taatgaaatattgttgtttcacatgttgaaatatttcttatgggagtatacaatttttgc 527
Query: 61 tgcaaagaaccacatttacaggatattctatggaaccaaaatcttggctaagaacagtgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tgcaaagaaccacatttacaggatattctatggaaccaaaatcttggctaagaacagtgc 467
Query: 121 cagtcaaaagccatcttttccaggaatggctgaggcacagggttctctgacagaacatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 cagtcaaaagccatcttttccaggaatggctgaggcacagggttctctgacagaacatgt 407
Query: 181 gttgtcagtctccttatctaacaaacaacaggtgtttgtcatgcacacacatatgtagct 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gttgtcagtctccttagctaacaaacaacaggtgtttgtcatgcacacacatatgtagct 347
Query: 241 cgggtgtttcctccatcaaagaaagaacgggaggccagatacataaagaaaatgctcaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 cgggtgtttcctccatcaaagaaagaacgggaggccagatacataaagaaaatgctcaca 287
Query: 301 acacggggcaaacaaagtcaccagtgctctcccaaggccgtcctgactgtccacaccaca 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 286 acacggggcaaacaaagtcaccagtgctctcccaaggccatcctgactgtccacaccaca 227
Query: 361 aagcataccagttatgtttataggaa 386
||||||||||||||||||||||||||
Sbjct: 226 aagcataccagttatgtttataggaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 786
Length adjustment: 9
Effective length of query: 377
Effective length of database: 777
Effective search space: 292929
Effective search space used: 292929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
