Query= MSMg01no475_l22.b1 MSMg01no475_l22.b1 CHROMAT_FILE:
MSMg01no475_l22.b1 PHD_FILE: MSMg01no475_l22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:37 2005
(415 letters)
>mm_chr10_121512804_121513616
Length = 813
Score = 708 bits (366), Expect = 0.0
Identities = 370/372 (99%), Gaps = 2/372 (0%)
Strand = Plus / Minus
Query: 44 tcatcagggaaatgcaaatcaaaacaaccctgagattccacctcacaccagtcagaatgg 103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 tcatcagggaaatgcaaatcaaaacaaccctgagattccacctcacaccagtcagaatgg 754
Query: 104 ctaagatcaaaaattcagttgacagcagatgctggcgaagatgtggagaaagaggaacac 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 ctaagatcaaaaattcagttgacagcagatgctggcgaagatgtggagaaagaggaacac 694
Query: 164 tcctccattgttggtgggattgcaagctggtataaccactgtggaaatcagtctggcgct 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 tcctccattgttggtgggattgcaagctggtataaccactgtggaaatcagtctggcgct 634
Query: 224 tcctcagaaaattggacatatggataaagaatgttaatgttttttaacccaaaataattg 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tcctcagaaaattggacatatggataaagaatgttaatgttttttaacccaaaataattg 574
Query: 284 ttttgagttcccatgcttttgctatgactaaaagatgtgagtctactctcagagcacact 343
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ttttgagttcccatgcttttgctatgactaaaagatgtgagtctactctcagagcacac- 515
Query: 344 tatctctttttgtaactagaatgtgttaatagaactcatataagcttcagggagttgcgg 403
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 -atctctttttgtaactagaatgtgttaatagaactcatataagcttcagggagttgcgg 456
Query: 404 cttggatccacc 415
||||||||||||
Sbjct: 455 cttggatccacc 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 813
Length adjustment: 9
Effective length of query: 406
Effective length of database: 804
Effective search space: 326424
Effective search space used: 326424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_l22.g1 MSMg01no475_l22.g1 CHROMAT_FILE:
MSMg01no475_l22.g1 PHD_FILE: MSMg01no475_l22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:37 2005
(408 letters)
>mm_chr10_121481666_121482473
Length = 808
Score = 735 bits (380), Expect = 0.0
Identities = 401/408 (98%)
Strand = Plus / Plus
Query: 1 acacacgtggccttattcattgggaacacacctaatgtgtccaacaaagctggggtttcc 60
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acacacatggctttattcattgggaacacacctaatgtgtccaacaaagctggggtttcc 260
Query: 61 ctccagcaacagaaaaggtgggcttcttttgtttagtatcagatgcagaggctggaatta 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 ctccagcaacagaaaaggtgggcttcttttgtttagtatcagatgcagtggctggaatta 320
Query: 121 aaagagtaggttattccaaaaactacaaatctaaatgccggcctggcccaagcaaggagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaagagtaggttattccaaaaactacaaatctaaatgccggcctggcccaagcaaggagg 380
Query: 181 gagctgggtagtgacaaggttaggagcccagagctggtctcccaagcgctctttcagagg 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 gagctgggtagtgacaaggttaggagcccagagctggtctcccaggcgctctttcagagg 440
Query: 241 ggctggcttcactgcacaggacagctgcctttacacaccctgatctgtcctttctctcac 300
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 441 ggctggcttcactgcacaggacagctgcctttacacatcctgagctgtcctttctctcac 500
Query: 301 tctctaggttgtgttcctgggtgtatcttagctgggctggacctcacggaattaaaataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctctaggttgtgttcctgggtgtatcttagctgggctggacctcacggaattaaaataa 560
Query: 361 ctaattcccatgtttgcatatgaatagtgaacctagtccctcctctgt 408
| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccaattcccatgtttgcatatgaatagtgaacctagtccctcctctgt 608
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 808
Length adjustment: 9
Effective length of query: 399
Effective length of database: 799
Effective search space: 318801
Effective search space used: 318801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
