Query= MSMg01no476_h11.b1 MSMg01no476_h11.b1 CHROMAT_FILE:
MSMg01no476_h11.b1 PHD_FILE: MSMg01no476_h11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:35 2005
(494 letters)
>mm_chr10_102493514_102494406
Length = 893
Score = 886 bits (458), Expect = 0.0
Identities = 485/494 (98%), Gaps = 1/494 (0%)
Strand = Plus / Plus
Query: 1 ctatgtcatggagctttgtctgtctgtttataaatatgcgttttaggagccccaaattcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctatgtcatggagctttgtctgtctgtttataaatatgcgttttaggagccccaaattcc 260
Query: 61 ctggaaaaacattcggtgtcttttaaatcaaagacatatgatacaagctctccagcactt 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctg-aaaaacattcggtgtcttttaaatcaaagacatatgatacaagctctccagcactt 319
Query: 121 gtataccaatagactaggtccgatttagggggaaacttctgtgtagtccgggtcaactgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtataccaatagactaggtccgatttagggggaaacttctgtgtagtccgggtcaactgc 379
Query: 181 agcttcggaagccttttccaccccattacccaaacccacttttgaccgaagtggtttcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 agcttcggaagccttttccaccccattacccaaacccacttttgaccgaagtggtttcag 439
Query: 241 gggtgttttttaaggtgtcacccacccacttcagatcccggaaacctcctgaaaattcaa 300
||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gggtggggtccaaggtgtcacccacccacttcagatcccggaaacctcctgaaaattcaa 499
Query: 301 atctattacacggaacccccttgcgttttgtgacatgtaaccgcatgagcccataacaga 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 500 atctattacacggaacccccttgcgttttgtgacatgtaaccacatgagcccataacaga 559
Query: 361 ggcaacagttaatggcaaactcccataacgaatgcataatctgcaggttttggcaagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggcaacagttaatggcaaactcccataacgaatgcataatctgcaggttttggcaagaag 619
Query: 421 ctgggtctttggttgccaagagttgcattaaatagattttgaggggttgagatagagctt 480
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 620 ctgggtctttggttgccaagagttgcattaaataaattttgaggggttgagatagagttt 679
Query: 481 atagcaatgacaca 494
||||||||||||||
Sbjct: 680 atagcaatgacaca 693
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 893
Length adjustment: 10
Effective length of query: 484
Effective length of database: 883
Effective search space: 427372
Effective search space used: 427372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no476_h11.g1 MSMg01no476_h11.g1 CHROMAT_FILE:
MSMg01no476_h11.g1 PHD_FILE: MSMg01no476_h11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:35 2005
(240 letters)
>mm_chr10_102664833_102665472
Length = 640
Score = 462 bits (239), Expect = e-135
Identities = 239/239 (100%)
Strand = Plus / Minus
Query: 1 ctactaaaggtaggatttgaagaatatgattacttaggtgaacttttggaaacctttcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ctactaaaggtaggatttgaagaatatgattacttaggtgaacttttggaaacctttcca 380
Query: 61 aggataatataatctgcattatggtgtgcaacaatgtcactcaccgcagtgttcttgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aggataatataatctgcattatggtgtgcaacaatgtcactcaccgcagtgttcttgaaa 320
Query: 121 cctctaggttccagtgattacatttcagggtttgcctggttgtagtctctctacactggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cctctaggttccagtgattacatttcagggtttgcctggttgtagtctctctacactggc 260
Query: 181 agagtgctcaaatcttcagatcctgtctctccgacgctgtggattaacttccttgcagg 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 agagtgctcaaatcttcagatcctgtctctccgacgctgtggattaacttccttgcagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
