Query= MSMg01no476_n17.b1 MSMg01no476_n17.b1 CHROMAT_FILE:
MSMg01no476_n17.b1 PHD_FILE: MSMg01no476_n17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:06 2005
(474 letters)
>mm_chr10_129601448_129602319
Length = 872
Score = 801 bits (414), Expect = 0.0
Identities = 459/474 (96%), Gaps = 2/474 (0%)
Strand = Plus / Minus
Query: 1 gtaagttaccttaacactctagaacatggaaaagtgagccaggtaatgatcaggaagcac 60
|||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||
Sbjct: 672 gtaagttaccttaacactctagaacatggaaacgtg-gccaggtaatgatcagggcgcac 614
Query: 61 ttattaaagtacaagtgcagcactaagtctcaagaatgaccaataacatggattccatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ttattaaagtacaagtgcagcactaagtctcaagaatgaccaataacatggattccatag 554
Query: 121 ctgtatttcttcatgccaaattatgattctgaccccagtagatgaaattttgagacatta 180
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 553 ctgtatttcttcatgccaaattacaattctgaccccagtagatgaaattttgagacatta 494
Query: 181 tgtttcatacctcatttgtaaatatgaaatatattatctcctcattttattattttatag 240
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 493 tgtttcgtacctcatttgtaaatatgaaatgtattatctcctcattttattattttatag 434
Query: 241 cttaaatgagtgtggctgaagcatctaggaagatgtctggcataacaaaatattatatta 300
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 433 attaaatgagtgtggctgaagcatttaggaagatgtctggcataacaaaatattatatta 374
Query: 301 acatttgtaataattgttattatccatactcaaaaacacgaagttcaaactggatataaa 360
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 373 acatttgtaataattgttattatccatactcaagaacacaaagttcaaactggatataaa 314
Query: 361 aaggagtagattgctttataaatagaagaacataagaaagtctatgtgagctctctaaga 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aaggagtagattgctttacaaatagaagaacataagaaagtctatgtgagctctctaaga 254
Query: 421 aatgtgttattattggttgtgaaagcatatttagagaaataaaaaaaaggcaat 474
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 253 aatgtgttattattggttgtgaaagcatatgtagagaaataaaaaaa-ggcaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 872
Length adjustment: 10
Effective length of query: 464
Effective length of database: 862
Effective search space: 399968
Effective search space used: 399968
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no476_n17.g1 MSMg01no476_n17.g1 CHROMAT_FILE:
MSMg01no476_n17.g1 PHD_FILE: MSMg01no476_n17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:06 2005
(424 letters)
>mm_chr10_129417670_129418493
Length = 824
Score = 789 bits (408), Expect = 0.0
Identities = 420/424 (99%)
Strand = Plus / Plus
Query: 1 agcaggcatccaaatggtagcaattgtttttcagggagatgtttatgttcaagttctcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcaggcatccaaatggtagcaattgtttttcagggagatgtttatgttcaagttctcta 260
Query: 61 tttagtgtagttatatggtccatgcattaaataattttctttgtattacccacagtgtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttagtgtagttatatggtccatgcattaaataattttctttgtattacccacagtgtca 320
Query: 121 taagaaataaatcaatcctaatcttaaggacttttcatgtcttcattttctatattggat 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 taagaaataaatcaatcctaatcttaaggacttttcatgtcctcattttctatattggat 380
Query: 181 cttgaagtgataatgaagattctcatgagaattcgagattcataaccacattttcccagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttgaagtgataatgaagattctcatgagaattcgagattcataaccacattttcccagg 440
Query: 241 agtcagatattttcaagttatccaatgttctttccagacaatctgtatttttaaaaacag 300
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtcagaaatgttcaagttatccaatgttctttccagacaatctgtatttttaaaaacag 500
Query: 301 attctcaatagaggaatctcaaatggatgagaaagaattgcttaaataaacgatcaacat 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 attctcaatagaggaatctcaaatggatgagaaagaattgcttaaataaatgatcaacat 560
Query: 361 tattagtcaccagggaaatgcaaatcaaaatgtctgtgagatttcattttatacttgtca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tattagtcaccagggaaatgcaaatcaaaatgtctgtgagatttcattttatacttgtca 620
Query: 421 gaat 424
||||
Sbjct: 621 gaat 624
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
