Query= MSMg01no476_p05.b1 MSMg01no476_p05.b1 CHROMAT_FILE:
MSMg01no476_p05.b1 PHD_FILE: MSMg01no476_p05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:14 2005
(391 letters)
>mm_chr10_44275120_44275910
Length = 791
Score = 663 bits (343), Expect = 0.0
Identities = 372/387 (96%), Gaps = 9/387 (2%)
Strand = Plus / Plus
Query: 1 gacctgtcagtctgaaaggaagagataagcatgctctgctcatggtatctcctgtctttg 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 gacctgtcagtctgaaaggaagagataagcatgctctgctcatgttatctcctgtctttg 260
Query: 61 ggaactagtcagccagcaggaaatacacttgctttcaggcctggaatttgatagcattaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaactagtcagccagcaggaaatacacttgctttcaggcctggaatttgatagcattaa 320
Query: 121 aaaattaaaaaaaaattataaacaaacttataattctatgaattatattcttagaataca 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaa---------aattataaacaaacttataattctatgaattatattcttagaataca 371
Query: 181 gcatagtaattcctgtcatactataaacacttaatgaataattctgatttggtacattaa 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 372 gcatagtaattcctgtcatactataaacacttaattaataattctgatttggtacattaa 431
Query: 241 ttaatgtatactgattcaagagtttgatgaattaaaggaatctagaaggaaggaaatcta 300
|||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ttaatgtaaattgagccaagagtttgatgaattaaaggaatctagaaggaaggaaatcta 491
Query: 301 tttaatattactgataagttatatagagaaagatagagagataggaataatggaacatga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tttaatattactgataagttatatagagaaagatagagagataggaataatggaacatga 551
Query: 361 ctactgcttcccagatactctggaagt 387
|||||||||||||||||||||||||||
Sbjct: 552 ctactgcttcccagatactctggaagt 578
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 791
Length adjustment: 9
Effective length of query: 382
Effective length of database: 782
Effective search space: 298724
Effective search space used: 298724
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no476_p05.g1 MSMg01no476_p05.g1 CHROMAT_FILE:
MSMg01no476_p05.g1 PHD_FILE: MSMg01no476_p05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:14 2005
(246 letters)
>mm_chr10_44292022_44292667
Length = 646
Score = 456 bits (236), Expect = e-133
Identities = 242/244 (99%)
Strand = Plus / Minus
Query: 1 tattttcatacttgaatcaaatttcatgttttattcaactgcttgtgagttttataaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tattttcatacttgaatcaaatttcatgttttattcaactgcttgtgagttttataaaat 244
Query: 61 ttatttagtagatttcttgtatcatctttaatttgtccacacatttacttgtatcgtcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ttatttagtagatttcttgtatcatctttaatttgtccacacatttacttgtatcgtcct 184
Query: 121 taaaaatctttgaacatgttttaaattgttctttctggttatttgtctgaaattctatct 180
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 183 taaaaatctttgaacatgttttaaattgttctttctgtttatttgtctgaaattttatct 124
Query: 181 aagtcactgtcattggccactattcttacaggagtctcacttttttgaagaggcattttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 aagtcactgtcattggccactattcttacaggagtctcacttttttgaagaggcattttg 64
Query: 241 tctt 244
||||
Sbjct: 63 tctt 60
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
