XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGGATCCGCGGAATTC
CGTCAGCATTCCCTGAGAGACTTTATTCTAGATCCATTAATTTGGTGCAA
GTAGTTACACACTGATAACAACAAATAGGTTAGAAAATTCTAACTATGGA
GATATCCATTATCTTCACTACTCAAGGATGTTCCATACACCAATACACTG
GTTTTTTTTTTAGTGGACCTTTTCAGAGATGTCAACTCAGACCCTGCTCA
CACACATGGACTCAGAACCAGTATCTTAATAAGACTCCCTGGTTATGTGT
GTGCATTTAGATATAGTTCTTGGCTCCATTCCAACCCATATATGTATATA
TGTATATCTGTGTGTGTATGTATGTGTGTGTATATACATACACACATATA
TATCGGCTTATTTTCTTTAACTAATGTGATAATTCTACAACTCAGAAAAA
CATTAAAACAAATTTCCAAAAAGAGGGCTTCTTTTTTGTTTCAGAAGAGA
TTAGAGTATTTTATTTTGCCCAATCAGAGCTCTTCAGCAAAGAAATTCAT
TTACATATATATGAACATTTCTCAGAAACATTAATTTGTAATACATTCTC
AAAATACCAGCTTAATGGTATTTATTTACAAAAATATTTCATCACCTAAT
TTTGAACCTATTTGCTGTGATGACAGTATTTTTTTTTTCTCATTAAGTTA
CAGAAACGCAAAAGAAC

NNNNCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGGCCCATAACTAAAC
ATAATAAAAGCAATTTACAACAGCCAATATCAAATTAAATGGAGACATAC
TTAAAGCAATCCCCCTGATATCAGGGACAAGATAAGAATGCCCACTCTCC
CCATATCTATTCAATATAGTACTCAAAGTGTTAGCTAGAACAATAAAACA
ACAAAAAAAGACCAAGGGGATACAAATTGGCAAAGAAGAAGTAAAGTTAT
CACTATTTGCAGATGATATGAAAATATTCTTAAGCAAGCCCAAGAATTCT
ACCAGAGAACTTCTCCAGCTGATAAACAACTTCAGCAAAGTTGCCAGATA
TAAAATTAAGTCAAATAAATCAGTAGCCTTCCTTTATACAAATGATAAAC
AAGCTGAGAAAGAAATTAGGGAAACAACTCCCTTCACAATAGCCACAAAT
AATATAAAATATCTTGAGGTAACTCTAACCAAACAAATGAAAGACCGGTA
TGACAATAACTTCAAGTCTCTCAAGAAAGAAATCAAAGAATATCTCACAA
AATGGAAATATCTCCCATGCTCATGGATTGGCAGAACTAATATAGTGAAA
ATGGCCATCCTACCAAGACACTATTAACTATGTTTGAACATCAGCAAGGA
CAGGAAGCAAGCTTTTAAGTAATTTCTAATAGGCACTGTCTGA

Query= MSMg01no477_f06.b1 MSMg01no477_f06.b1 CHROMAT_FILE:
MSMg01no477_f06.b1 PHD_FILE: MSMg01no477_f06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:44 2005
         (672 letters)



>mm_chr10_9474697_9475768
          Length = 1072

 Score = 1251 bits (647), Expect = 0.0
 Identities = 664/673 (98%), Gaps = 6/673 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaattccgtcagcattccctgagagactttattctagatccattaatttggtgcaagtag 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gaattccgtcagcattccctgagagactttattctagatccattaatttggtgcaagtag 259

                                                                       
Query: 66  ttacacactgataacaacaaataggttagaaaattctaactatggagatatccattatct 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttacacactgataacaacaaataggttagaaaattctaactatggagatatccattatct 319

                                                                       
Query: 126 tcactactcaaggatgttccatacaccaatacactggtttttttttt------agtggac 179
           |||||||||||||||||||||||||||||||||||| ||||||||||      |||||||
Sbjct: 320 tcactactcaaggatgttccatacaccaatacactgtttttttttttttttttagtggac 379

                                                                       
Query: 180 cttttcagagatgtcaactcagaccctgctcacacacatggactcagaaccagtatctta 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cttttcagagatgtcaactcagaccctgctcacacacatggactcagaaccagtatctta 439

                                                                       
Query: 240 ataagactccctggttatgtgtgtgcatttagatatagttcttggctccattccaaccca 299
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 440 ataagactccctggttatgtgtgtgcatttagatctagttcttggctccattccaaccca 499

                                                                       
Query: 300 tatatgtatatatgtatatctgtgtgtgtatgtatgtgtgtgtatatacatacacacata 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tatatgtatatatgtatatctgtgtgtgtatgtatgtgtgtgtatatacatacacacata 559

                                                                       
Query: 360 tatatcggcttattttctttaactaatgtgataattctacaactcagaaaaacattaaaa 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tatatcggcttattttctttaactaatgtgataattctacaactcagaaaaacattaaaa 619

                                                                       
Query: 420 caaatttccaaaaagagggcttcttttttgtttcagaagagattagagtattttattttg 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 caaatttccaaaaagagggcttcttttttgtttcagaagagattagagtattttattttg 679

                                                                       
Query: 480 cccaatcagagctcttcagcaaagaaattcatttacatatatatgaacatttctcagaaa 539
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 680 cccaatcagagctcttcagcaaagaaattcatttacatatataggaacatttctcagaaa 739

                                                                       
Query: 540 cattaatttgtaatacattctcaaaataccagcttaatggtatttatttacaaaaatatt 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 cattaatttgtaatacattctcaaaataccagcttaatggtatttatttacaaaaatatt 799

                                                                       
Query: 600 tcatcacctaattttgaacctatttgctgtgatgacagtattttttttttctcattaagt 659
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tcatcacctaattttgaacctatttgctgtgatgacagtattttttttttctcattaagt 859

                        
Query: 660 tacagaaacgcaa 672
           |||||||||||||
Sbjct: 860 tacagaaacgcaa 872


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space:   703044
Effective search space used:   703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)