Query= MSMg01no477_g11.b1 MSMg01no477_g11.b1 CHROMAT_FILE:
MSMg01no477_g11.b1 PHD_FILE: MSMg01no477_g11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:50 2005
(456 letters)
>mm_chr10_43432857_43433712
Length = 856
Score = 451 bits (233), Expect = e-131
Identities = 245/249 (98%)
Strand = Plus / Minus
Query: 5 gaattccctgtgtcctgaaccctcttcagggattttctcattactgagctccaaagatgg 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 gaattccctgtgccctgaaccctcttcagggattttctcattactgagctccaaagatgg 394
Query: 65 cttgtccctggctgtgttcaatcctaggcccgagacacgaccagcagacagttgtaaata 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 attgtccctggctgtgttcaatcctaggcccgagacacgaccagcagacagttgtaaata 334
Query: 125 cagaatgaaatattcaaatgagggtgtttcagtacatgggacagtttgaggggagagcag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 cagaatgaaatattcaaatgagggtgtttcagtacatgggacagtttgaggggagagcag 274
Query: 185 atacagtggcttggatttaaaatgttctccaaaaggttgggccccgatggacagtgtcca 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 273 atacagtggcttggatttaaaatgttctccaaaaggttgggccccgatggacagggtcca 214
Query: 245 gaggtagag 253
||| |||||
Sbjct: 213 gagatagag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no477_g11.g1 MSMg01no477_g11.g1 CHROMAT_FILE:
MSMg01no477_g11.g1 PHD_FILE: MSMg01no477_g11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:50 2005
(562 letters)
>mm_chr10_43233654_43234617
Length = 964
Score = 1038 bits (537), Expect = 0.0
Identities = 557/564 (98%), Gaps = 2/564 (0%)
Strand = Plus / Plus
Query: 1 aattccatgggatttgttctggtcttgaggatgtaaccgataggattccaagccatgtga 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 aattccatgggatttgttctggtcttgaggatgtaaccgagaggattccaagccatgtga 260
Query: 61 aaattgtcctgctttccagaaagtggagtgtggccctgcaacatcagaagcacaatcggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaattgtcctgctttccagaaagtggagtgtggccctgcaacatcagaagcacaatcggc 320
Query: 121 cattgagtttttacaagtcccatctcgtcacatctgagaaatggcgggctctattaactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 cattgagtttttacaagtcccatctcgtcacatctgagaaatggcgggctctaggaactg 380
Query: 181 agcgggactttttgtaacccagagtgtgttaaattctgggaacctgtattttggtttcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcgggactttttgtaacccagagtgtgttaaattctgggaacctgtattttggtttcct 440
Query: 241 tant-ctttaactatgtagggcttctctcctcccaacccccacctccacccccagtccca 299
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taatactttaactatgtagggcttctctcctcccaacccccacctccacccccagtccca 500
Query: 300 tcatcccttcagtgaaaa-gagctggtcactctgggagctgtttcctgcccactggaccg 358
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcatcccttcagtgaaaaagagctggtcactctgggagctgtttcctgcccactggaccg 560
Query: 359 tatggtgtcctcactcacccatccgtacagggagttccagtgggcatttttttttcatga 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatggtgtcctcactcacccatccgtacagggagttccagtgggcatttttttttcatga 620
Query: 419 agcaatataaatataaaatacttattttttcagaatttaatggttttcatgaaatctgtt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agcaatataaatataaaatacttattttttcagaatttaatggttttcatgaaatctgtt 680
Query: 479 ggcaactactttccctgtcctcatctaaattctttgtttgtgttttggacgatttttgcc 538
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 681 ggcaactactttccctgtcctcatctaaattctttgtttgtgttttggatgatttttgcc 740
Query: 539 ttgtatccagaggactaaagatta 562
||||||||||||||||||||||||
Sbjct: 741 ttgtatccagaggactaaagatta 764
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 964
Length adjustment: 10
Effective length of query: 552
Effective length of database: 954
Effective search space: 526608
Effective search space used: 526608
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
