Query= MSMg01no478_d22.b1 MSMg01no478_d22.b1 CHROMAT_FILE:
MSMg01no478_d22.b1 PHD_FILE: MSMg01no478_d22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:55 2005
(402 letters)
>mm_chr10_68989515_68990316
Length = 802
Score = 748 bits (387), Expect = 0.0
Identities = 396/399 (99%)
Strand = Plus / Plus
Query: 1 gccaaatagaagcagccatacttctggttcatttgcatgttggtactgttaggatacttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gccaaatagaagcagccatacttctggttcatttgcatgttggtactgttaggatacttt 260
Query: 61 gacaacctagacgctctcttcagaacgggtctcggtagctctgtctaaaatcatttagga 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacaaccaagacgctctcttcagaacgggtctcggtagctctgtctaaaatcatttagga 320
Query: 121 tccttgctgttgctaagtaaaacacagggatttggggaagatcaaaggcatgattcacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccttgctgttgctaagtaaaacacagggatttggggaagatcaaaggcatgattcacca 380
Query: 181 gtccctcatgtgtgaagagtcctgccaatatcactggcctctaaaaagaattgttagtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtccctcatgtgtgaagagtcctgccaatatcactggcctctaaaaagaattgttagtct 440
Query: 241 agtgaaagaaaagtaccccgccctagacagccacactggtagagtttcagggaaggaagt 300
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 agtgaaagaaaattaccccgccctagacagccacaccggtagagtttcagggaaggaagt 500
Query: 301 atcaaaaaggagtccgcccacttgctagctagcctctttgaacgcctgtctctccctgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atcaaaaaggagtccgcccacttgctagctagcctctttgaacgcctgtctctccctgtt 560
Query: 361 tttctaatccacttggattatatcgttatactttaatgg 399
|||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttctaatccacttggattatatcgttatactttaatgg 599
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 802
Length adjustment: 9
Effective length of query: 393
Effective length of database: 793
Effective search space: 311649
Effective search space used: 311649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_d22.g1 MSMg01no478_d22.g1 CHROMAT_FILE:
MSMg01no478_d22.g1 PHD_FILE: MSMg01no478_d22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:55 2005
(623 letters)
>mm_chr10_69165335_69166357
Length = 1023
Score = 775 bits (401), Expect = 0.0
Identities = 441/455 (96%), Gaps = 7/455 (1%)
Strand = Plus / Minus
Query: 1 ctaatctatcccttcaattgagaggcatgtatcacacggatgcaaggctccatccagctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ctaatctatcccttcaattgagaggcatgtatcacacggatgcaaggctccatccagctg 389
Query: 61 cttggctggtcctgagaaggacagagaacatcaaccttctggctccttccaccttcctct 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 388 cttggctggtcctgagaaggacagagaacatcaaccttctggttccttccaccttcctct 329
Query: 121 agaagctggatttgatgtgtgaccctcaaagcaagcatgctgcaaccaagagtcttggtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 agaagctggatttgatgtgtgaccctcaaagcaagcatgctgcaaccaagagtcttggtc 269
Query: 181 tttccctgtgggcaacctgttaccacaaccaatgtcagaaagtgactcctcttcacaaag 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 268 tttccctgtgggcaacctgttaccacaaccgatgtcagaaagtgactcctcttcacaaag 209
Query: 241 ccattcttttttgttttgttttgttttgttttgttttgttttgttttcaagacagggttt 300
|||||||||||| |||| |||| |||| |||| ||||| ||| ||||||||||||||||
Sbjct: 208 ccattctttttt-tttt-tttt-tttt-tttt-ttttggttt--tttcaagacagggttt 156
Query: 301 ctctgtgtagccctggctgtcctggaactcactctgtagaccaggctggcctcaaactca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 155 ctctgtgtagccctggctgtcctggaactcactctgtagaccaggctggcctcgaactca 96
Query: 361 gaaatctgcctgcctctgcctccccagtgctgggatgaaaggcatgtgccaccactgccc 420
|||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 95 gaaatccgcctgcctctgcctccccagtgctgggatgaaaggcatgtgccactactgccc 36
Query: 421 agccacaaagtcattcttgattgcttaccagagcg 455
||||||||||||||||||||||||||||||||||
Sbjct: 35 ggccacaaagtcattcttgattgcttaccagagcg 1
Score = 76.1 bits (39), Expect = 7e-18
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 249 ttttgttttgttttgttttgttttgttttgttttgtttt 287
|||||||||||||||||||||||||||||||||||||||
Sbjct: 955 ttttgttttgttttgttttgttttgttttgttttgtttt 917
Score = 76.1 bits (39), Expect = 7e-18
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 249 ttttgttttgttttgttttgttttgttttgttttgtttt 287
|||||||||||||||||||||||||||||||||||||||
Sbjct: 960 ttttgttttgttttgttttgttttgttttgttttgtttt 922
Score = 68.4 bits (35), Expect = 2e-15
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 253 gttttgttttgttttgttttgttttgttttgtttt 287
|||||||||||||||||||||||||||||||||||
Sbjct: 961 gttttgttttgttttgttttgttttgttttgtttt 927
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 5
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space: 620969
Effective search space used: 620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
