XXXXXXXXXXXXXXXXXXXXXXXXXXXCCAAAGAGGATCCGCGGAATTCC
TCATTTCCTAGAGAGCTCAAAGAGCTTGCATGTAAATCAGTGTAAACACA
CTTTGTAGAACCAACTGATACATGAAGGAGCTTATACTACATACAAACTA
AGTCACACCCTTGGGTGGGTCTGTAAATAATGGATGCTGGAACAGGGAGA
AAGATTTACCTCTGTGATGAGGTCACTTAGTAAGGAGTGTATGCTCCTGG
GAAGAATATCACATCCAGGACCCTATACGTGACCCTAAGGAAACTCATTA
GGATTGGCCTGTCTGCCAGTATGTCTGTCCCTCTCTCCTTACCGCCACTG
AAAACGCAGGGCATGAAAATAGGAGGGAGCTGATTGGGAAGAAGATAGGA
ATGGGTGGAAGTAGAGGTCAAGAGAATAATGAGGGTTGAATAGGTTTGAA
CCCACTATACACGTGTATGAAAATATCACAAGGAACCTAGTTTATGTATA
TTTAACATATACTAACAAAACAGTCAAATGTTTATGCTTTTTTAATTATG
ATTTAGGATTTTGTTATTATTATTTGTTCTTGATATTATGAGAAGTAAGT
TCTCTTCATGTAGCTCAGACTAGCTTCAAACTCATCGGGCTGCCTAAGTC
TTTCATTGCTGAGATGACAGGTTTAAACCACACTGAAAAGTTTGGGATAG
GTCTGTTGTTGCCACTTACATTATAAAG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTTCCTTTCCAATTTGTATCCTGTTGACCTTTT
TTTGTCTAAATGTTCTAGCTAAAACTTTGAGTACTACTATATTAAATAAA
TAGGAAGAGAGTGGGCAGCCTTGCCTTGTACCTGATTTTATGAGACTGAT
TCAAGTATCTCTCCATTTAATTTGATGTTGGCTATTGGTTTATTGTACAT
TGCTTTTATTTTGCTTAGGTATGTGTCTTGAAATTTTGATCTTTCCCAAA
CTTTTAACATGAAGGGTTGCTGTATTTTGTCAAAGGCTTTTTCAGCATCT
ACTGAGATGATCATGTGATTTTTTTTTTTGGTTGAATTTGTCTATATAGT
GGATTACATTGAGCATTTTCCTTATATTGAACTATCCCTGCATCCCTGGG
GTGAAGCCTACTTGACCATGGTGAATGATTGTTTAATGTGTTCTTGGATT
AGATTTGCAATAATGTTATTGAGTATTGTTGCATCAATATCCATAAGGGA
AATTGGTCTGAAGTTCTCTTTCTTTGTTGGGTCTTTTTGTGGTTTAGGTA
CCAGCATAACTGTGGCTTCTTACAACAAATTATGTAGTGTTCCTTCTGTT
TCTATTTTGTGGATTAGTTTTGAAGAGTATTTGTATAAGGTCTTCTTTGA
CTTTGGCTAATGAAAGCTTGCTTCTTGAA

Query= MSMg01no478_e24.b1 MSMg01no478_e24.b1 CHROMAT_FILE:
MSMg01no478_e24.b1 PHD_FILE: MSMg01no478_e24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:00 2005
         (399 letters)



>mm_chr10_33752129_33752928
          Length = 800

 Score =  642 bits (332), Expect = 0.0
 Identities = 380/396 (95%), Gaps = 1/396 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   tatgtctgtccctctctccttaccgccactgaaaacgcagggcatgaaaataggagggag 64
           ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 600 tatgtctctccctctctccttaccgccactgaaaacacagggcatgaaaataggagggag 541

                                                                       
Query: 65  ctgattgggaagaagataggaatgggtggaagtaga-ggtcaagagaataatgagggttg 123
           ||||||||||||| |||||||||||||||||||||| || |  |||||||||||||||||
Sbjct: 540 ctgattgggaagaggataggaatgggtggaagtagagggacgcgagaataatgagggttg 481

                                                                       
Query: 124 aataggtttgaacccactatacacgtgtatgaaaatatcacaaggaacctagtttatgta 183
           ||||||||  |||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 480 aataggttcaaacccactatacacatgtatgaaaatatcacaaggagcctagtttatgta 421

                                                                       
Query: 184 tatttaacatatactaacaaaacagtcaaatgtttatgcttttttaattatgatttagga 243
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 420 tatttaacatatactaacaaaacagtcaaatgtttatgctttttaaattatgatttagga 361

                                                                       
Query: 244 ttttgttattattatttgttcttgatattatgagaagtaagttctcttcatgtagctcag 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ttttgttattattatttgttcttgatattatgagaagtaagttctcttcatgtagctcag 301

                                                                       
Query: 304 actagcttcaaactcatcgggctgcctaagtctttcattgctgagatgacaggtttaaac 363
           ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 300 actagcttcaaactcatagggctgcctaagtcttccattgctgagatgacaggtttaaac 241

                                               
Query: 364 cacactgaaaagtttgggataggtctgttgttgcca 399
           || ||||||||||||||||||| |||||||||||||
Sbjct: 240 caaactgaaaagtttgggatagttctgttgttgcca 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 800
Length adjustment: 9
Effective length of query: 390
Effective length of database: 791
Effective search space:   308490
Effective search space used:   308490
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)