Query= MSMg01no478_n14.b1 MSMg01no478_n14.b1 CHROMAT_FILE:
MSMg01no478_n14.b1 PHD_FILE: MSMg01no478_n14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:39 2005
(425 letters)
>mm_chr10_77693613_77694439
Length = 827
Score = 783 bits (405), Expect = 0.0
Identities = 421/427 (98%), Gaps = 2/427 (0%)
Strand = Plus / Plus
Query: 1 cacacacagaatcaagactcaggagtggtggtttagcctgtaaccctagtgtagtactca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacacacagaatcaagactcaggagtggtggtttagcctgtaaccctagtgtagtactca 260
Query: 61 agtggaggcaggagtaatgcaagtttgaggccagcctgggctccatagcaagttcaagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtggaggcaggagtaatgcaagtttgaggccagcctgggctccatagcaagttcaagtc 320
Query: 121 cagcttgaactataacaggattctaactcaaaagaaaaaacaaaacaaaacatgaagagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagcttgaactataacaggattctaactcaaaagaaaaaacaaaacaaaacatgaagagg 380
Query: 181 ttaggaaagtgaagccctgggctcagtccccagcaccacaatcccaacaatgaaacagcc 240
|||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||
Sbjct: 381 ttaggaaagtgaagccctggactcaatccccagcaccacaatcacaacaatgaaacagcc 440
Query: 241 ttaaagagaaagacccataagctaggggaggccactgttgatcagtctgcactccagaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttaaagagaaagacccataagctaggggaggccactgttgatcagtctgcactccagaac 500
Query: 301 agag--gcactactgctggagcacctattcaatcactcaagctcctgaattacagggcaa 358
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 501 agagaggcactactgctggagcacctattcaatcactcaagctcctgaattacaggacaa 560
Query: 359 gtccagccaaaacacagagcctgtaccttctccattccattggttctcttggaagctgct 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtccagccaaaacacagagcctgtaccttctccattccattggttctcttggaagctgct 620
Query: 419 gggaaag 425
|||||||
Sbjct: 621 gggaaag 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 827
Length adjustment: 9
Effective length of query: 416
Effective length of database: 818
Effective search space: 340288
Effective search space used: 340288
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_n14.g1 MSMg01no478_n14.g1 CHROMAT_FILE:
MSMg01no478_n14.g1 PHD_FILE: MSMg01no478_n14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:39 2005
(239 letters)
>mm_chr10_77851701_77852339
Length = 639
Score = 447 bits (231), Expect = e-130
Identities = 237/239 (99%)
Strand = Plus / Minus
Query: 1 atggaggtttggggttcccagtgggagctgcaatgctaaagctcgaggtgccagtgggtc 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 439 atggaggtttggggttcccagtgggagctgcaatgctaaagctcaaggtgccagtgggtc 380
Query: 61 cccaggattctggccagcccttgttaccccatctgttctggtcacatgttcctagacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cccaggattctggccagcccttgttaccccatctgttctggtcacatgttcctagacaca 320
Query: 121 atgtctgaccacttacaccttctctcttacattaactcctcatatggactaaactctgca 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 319 atgtctgaccacttacaccttctctcttacattaactccccatatggactaaactctgca 260
Query: 181 ggggtagcccaccctagctgtccacaggcaggacctggctcctgaggacacaggtccta 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ggggtagcccaccctagctgtccacaggcaggacctggctcctgaggacacaggtccta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
