Query= MSMg01no479_f14.b1 MSMg01no479_f14.b1 CHROMAT_FILE:
MSMg01no479_f14.b1 PHD_FILE: MSMg01no479_f14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:18 2005
(384 letters)
>mm_chr10_121985750_121986531
Length = 782
Score = 601 bits (311), Expect = e-176
Identities = 365/384 (95%), Gaps = 4/384 (1%)
Strand = Plus / Minus
Query: 1 tgacagcactcggaaactgcatgcagatgcacacttccataccagctgtcacacagcagc 60
||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||
Sbjct: 581 tgacagcactcggaaactgcatgcagatgtacatttccataccagttgtcacacagcagc 522
Query: 61 attcagaagttgcaagtgtgtgaagacacatatgaatgcctgcgtgacagcactcgggaa 120
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 521 attcagaagttgcaagtgtgtgaagacacatatgaatgcctgcgtgatagcactcgggga 462
Query: 121 ctgcatgcctgtgaatctgtgcatgcactctcacgtataagttctcaaagaatgcgtgca 180
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 461 --gcatgcctgtgaatctgtgtatgcactcttacgtataagttctcaaagaatgcgtgca 404
Query: 181 tgtgaatgtgcttgtacatgttggcatatgatcattcttcaacactccatggtgggggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 403 tgtgaatgtgcttgtacatgttggcatatgatcattcttcaacactccatggtggaggct 344
Query: 241 tccctttggggaaagttctggtgagaaacctcccatgagaatctagggacctgcctgcag 300
||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 343 tccctttggagaaagttctggtgagaaacctcccacgagaatctggggacctgcctgcag 284
Query: 301 ccataaaaagatgctcccttggctgcatcctgccagtctataccaagctatggtcaaaac 360
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 283 acataaaaagatgctcccttggctacatcctgccagtctataccaagctatggtcaaaac 224
Query: 361 tcttagnntac-tctccctctccc 383
||| || ||| ||||||||||||
Sbjct: 223 tctcagc-tacctctccctctccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 782
Length adjustment: 9
Effective length of query: 375
Effective length of database: 773
Effective search space: 289875
Effective search space used: 289875
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_f14.g1 MSMg01no479_f14.g1 CHROMAT_FILE:
MSMg01no479_f14.g1 PHD_FILE: MSMg01no479_f14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:19 2005
(318 letters)
>mm_chr10_121811884_121812601
Length = 718
Score = 352 bits (182), Expect = e-101
Identities = 226/242 (93%), Gaps = 5/242 (2%)
Strand = Plus / Plus
Query: 1 ctttagaatatgaatgttcagtgaatgctgaacctgaggacagatctgtggcatcattct 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttagaatatgaatgttcagtgtatgctgaacctgaggacagatctgtggcatcattct 260
Query: 61 attattctaggtatggatatatttaatattttccactaaaatatttaaagacaatcctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attattctaggtatggatatatttaatattttccactaaaatatttaaagacaatcctga 320
Query: 121 aataactttttatatcaattggattacttttaattttgtcttttaaaaacatgcttgaga 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aataactttttatatcaattgaattacttttaattttgtcttttaaaaacatgcttgaga 380
Query: 181 cataataataattattattaataatagtaataataagaagaa--gaaagaggagaagaag 238
||||||||||| || | ||||| | ||| ||||| || || |||||| ||||||||
Sbjct: 381 aataataataataataac-aataacaataacaataataataatagaaaga--agaagaag 437
Query: 239 aa 240
||
Sbjct: 438 aa 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
