Query= MSMg01no480_g18.b1 MSMg01no480_g18.b1 CHROMAT_FILE:
MSMg01no480_g18.b1 PHD_FILE: MSMg01no480_g18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:43 2005
(609 letters)
>mm_chr10_43475261_43476268
Length = 1008
Score = 1064 bits (550), Expect = 0.0
Identities = 588/606 (97%), Gaps = 11/606 (1%)
Strand = Plus / Minus
Query: 6 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctgtctgtctgtctgtctgtct 65
|||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 830 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtctgtctgtctgtct 771
Query: 66 gtctgtctgtctgtctatctgtgtggttgttcataggcttgaaatgtcctctaccccacg 125
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 gtctgtctatctgtctatctgtgtggttgttcataggcttgaaatgtcctctaccccacg 711
Query: 126 ggtcacatcatggacacattgcacttcactgtacttgtgccccaaaccattctaagatgg 185
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 ggtcacatcacggacacattgcacttcactgtacttgtgccccaaaccattctaagatgg 651
Query: 186 ctttttttctcttttcaaatctcatcttctatctgaatgttgctgaacatagaagtggat 245
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ctttttttctcttttcaaatctcatcttctatctgaatgttgctgaacatagaagtgga- 592
Query: 246 tttttt-----ttgctggttgttgtcctaatggaaaggagcagaaagacattttttcccc 300
|| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 591 ----ttgggggttgctggttgttgtcctaatggaaaggagcagaaagaca-tttttcccc 537
Query: 301 agaggatgtgtcttgggtctttgagctctccctcctgcctttgctgcctcactttggatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 agaggatgtgtcttgggtctttgagctctccctcctgcctttgctgcctcactttggatg 477
Query: 361 taagattaaggaaggatccagtcttatttttcttcatcctttctttctctcctcttttcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 taagattaaggaaggatccagtcttatttttcttcatcctttctttctctcctcttttcc 417
Query: 421 cattataaataaccttttaataacccaaagtgctgactctgtattatatgaggttgtagg 480
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 416 cattataaataaccttttaataacccaaagtgctgactctatattatatgaggttgtagg 357
Query: 481 tatattaagcaacttttcttactatgacaaaaatacccaaaatagtcaacttaaaaagaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tatattaagcaacttttcttactatgacaaaaatacccaaaatagtcaacttaaaaagaa 297
Query: 541 gaaagttagaggatcagaggtgaggaagacactacatctgtccccaacaccaggagaaac 600
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 296 gaaagttagaggatcagaggtgaggaagacacaacatctgtccccaacaccaggagaaac 237
Query: 601 tgggac 606
||||||
Sbjct: 236 tgggac 231
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 65
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1008
Length adjustment: 10
Effective length of query: 599
Effective length of database: 998
Effective search space: 597802
Effective search space used: 597802
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no480_g18.g1 MSMg01no480_g18.g1 CHROMAT_FILE:
MSMg01no480_g18.g1 PHD_FILE: MSMg01no480_g18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:43 2005
(401 letters)
>mm_chr10_43321473_43322273
Length = 801
Score = 609 bits (315), Expect = e-179
Identities = 360/401 (89%), Gaps = 40/401 (9%)
Strand = Plus / Plus
Query: 1 atgggtttctgggggtttcttagcaaggatggcatttattaggctgagtatgtttcttca 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 atgggtttctgggggtttcttagcaaggatggcatttattaagctgagtatgtttcttca 260
Query: 61 tttctgcatccatgattgagcttggaccggagtaatacaaagccatctgcaaggagcgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttctgcatccatgattgagcttggaccggagtaatacaaagccatctgcaaggagcgag 320
Query: 121 ggtgtgtgtgtattcatatatatatatatatgtatgtatatatatatatatacatacata 180
||||||||||||||||||||||||||||||||
Sbjct: 321 ggtgtgtgtgtattcatatatatatatatatg---------------------------- 352
Query: 181 tatatatatatgactgatacatttgtgtagcatttgaaagcaaaagaccattacaaacat 240
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ------------actgatacatttgtgtagcatttgaaagcaaaagaccattacaaacat 400
Query: 241 gaatgtttcctgctcttttaatttattcaagaattctgtcactgaatgtcagagtaaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gaatgtttcctgctcttttaatttattcaagaattctgtcactgaatgtcagagtaaaac 460
Query: 301 atcactttcatgcacttttggcatgaaatcattacacttagtctaaacaaaccctgaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 atcactttcatgcacttttggcatgaaatcattacacttagtctaaacaaaccctgaaac 520
Query: 361 agatggcacaaagactctaagaacggttctgtattgggaca 401
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 agatggcacaaagactctaagaacggttctgtattgggaca 561
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 801
Length adjustment: 9
Effective length of query: 392
Effective length of database: 792
Effective search space: 310464
Effective search space used: 310464
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
