Query= MSMg01no480_l14.b1 MSMg01no480_l14.b1 CHROMAT_FILE:
MSMg01no480_l14.b1 PHD_FILE: MSMg01no480_l14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:07 2005
(629 letters)
>mm_chr10_112075575_112076601
Length = 1027
Score = 816 bits (422), Expect = 0.0
Identities = 465/480 (96%), Gaps = 4/480 (0%)
Strand = Plus / Minus
Query: 1 gaaaatgaaattatgtcctttgctagaaaatgaagaagcagagatcattaaaggaaacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gaaaatgaaattatgtcctttgctagaaaatgaagaagcagagatcattaaaggaaacat 418
Query: 61 gctagtgccacaaatatggatttcatagtttctgtgatttgtgaaacctatagatataga 120
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 417 gctagtgccacaaatatggatttc--agtttctgtgatttgtgaaacctatagatataga 360
Query: 121 tttataagatacctacacaaacagaggaacgtcgaaagtaacaagaagcccactggggct 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 359 tttataagatacctacacaaacagaggaacatcgaaagtaacaagaagcccactggggct 300
Query: 181 gaggattgacaagggagtgggggaagggtaggaaagagtaatagaggtggtaactgagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 299 gaggattgacaagggagtgggggaagggtaggaaagagtaatagaggtggtgactgagat 240
Query: 241 caaagtacatctaattcttagatggaaatatcagaataccatgtctccacctctgtattt 300
||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 239 caaagtacatcgcattcttagatggaaatataagaatactgtgtctccacctctgtattt 180
Query: 301 gtcaggcactggcagagcctctcaggagacagttatatcaggcttctgtcagcaagcatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 179 gtcaggcactggcagagcctctcaggagacagttatatcaggcttctgtcaacaagcatt 120
Query: 361 tgtt-gttatccacaatagtgtctgggtttcgtgactgtgtatgggatggacacccaggt 419
|||| | ||||| |||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 119 tgttag-tatccccaatagtgtctgggtttcgtgactgtatatgggatgggcacccaggt 61
Query: 420 gtggcagtctggaatgagcacagggtccccaatgaaggagctagagagctgaaggggttt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 gtggcagtctggaatgagcacagggtccccaatgaaggagctagagagctgaaggggttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1027
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1017
Effective search space: 629523
Effective search space used: 629523
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no480_l14.g1 MSMg01no480_l14.g1 CHROMAT_FILE:
MSMg01no480_l14.g1 PHD_FILE: MSMg01no480_l14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:07 2005
(638 letters)
>mm_chr10_111920489_111921526
Length = 1038
Score = 1180 bits (610), Expect = 0.0
Identities = 630/637 (98%)
Strand = Plus / Plus
Query: 1 aggtcagccttagccacagagagctcaagccaagtctgagcaacttgttgagagacttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtcagccttagccacagagagctcaagccaagtctgagcaacttgttgagagacttta 260
Query: 61 actccataccacaacaaaacacaaaacaaacaaaggaatagagagctatagagctgtaga 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 actccataccacaacaaaacacaaaacaaacaaaggaacagagagctatagagctgtaga 320
Query: 121 attgcttgtttagcatgctcccgaagaagccatgttcaaaacaggatgggagaaatgggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attgcttgtttagcatgctcccgaagaagccatgttcaaaacaggatgggagaaatgggg 380
Query: 181 tgggaaggagaaattgaaaactttgtgtagcaccatgagtagaactgaaaattagtagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggaaggagaaattgaaaactttgtgtagcaccatgagtagaactgaaaattagtagtt 440
Query: 241 tgtaatangaggtcagggatttttgtcccactgtatcaaaatgagaaggaaggtcgtgga 300
|| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaaagatgaggtcagggatttttgtcccactgtatcaaaatgagaaggaaggtcgtgga 500
Query: 301 tgcagcttcagggaacagcttttgactggcttgtctgaggccctgcattccattgccaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgcagcttcagggaacagcttttgactggcttgtctgaggccctgcattccattgccaac 560
Query: 361 accacaaacacccacaaaacacccaaagcaacaaaaaagaaatggagaaggaaagaggaa 420
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 561 accacaaacacccacaaaacacccaaagcaacaaaaaagaaagggagaaggaaagaggag 620
Query: 421 gagataagagattgtaagaggaaaatgcaattttcaacactaatgagattttctaagaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagataagagattgtaagaggaaaatgcaattttcaacactaatgagattttctaagaat 680
Query: 481 cataagagatagcaatatgcatctgagtgatgcttcttgctcacaacctgaaataaatga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cataagagatagcaatatgcatctgagtgatgcttcttgctcacaacctgaaataaatga 740
Query: 541 aacaaatcagactgaaatcgcccagagtttcaaacaaaaacaaagacttgcccttccgga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aacaaatcagactgaaatcgcccagagtttcaaacaaaaacaaagacttgcccttccgga 800
Query: 601 aaggaggaatagtcctccatcaacagagttctagaca 637
||||||||||||||||||||||||||||||| |||||
Sbjct: 801 aaggaggaatagtcctccatcaacagagttccagaca 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
