Query= MSMg01no481_c21.b1 MSMg01no481_c21.b1 CHROMAT_FILE:
MSMg01no481_c21.b1 PHD_FILE: MSMg01no481_c21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:43 2005
(623 letters)
>mm_chr10_9035462_9036485
Length = 1024
Score = 1158 bits (599), Expect = 0.0
Identities = 608/611 (99%), Gaps = 1/611 (0%)
Strand = Plus / Plus
Query: 14 gaattcctctggcgatcgtgtcagcacctgatgccacttccattttcattcctatatttc 73
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 gaattcctctggcgagcgtgtcagcacctgatgccacttccattttcattcctatatttc 273
Query: 74 actctgggagcctgatacatgg-ccaggcctgacaagaataaatttataaggatgcaagc 132
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 274 actctgggagcctgatacatgggccaggcctgacaagaataaatttataaggatgcaagc 333
Query: 133 tacagaaagccttgaatgcattccagggaaaggtccatgggggcaacaaagaaatcatct 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tacagaaagccttgaatgcattccagggaaaggtccatgggggcaacaaagaaatcatct 393
Query: 193 ctaactcatttttggagcattgtaacaagggcattttccaggggagaaaaatcatatttt 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ctaactcatttttggagcattgtaacaagggcattttccaggggagaaaaatcatatttt 453
Query: 253 attgttgcacttgtaatgttcacagctgttaaggactttgccacctctaaatgacaatat 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 attgttgcacttgtaatgttcacagctgttaaggactttgccacctctaaatgacaatat 513
Query: 313 attatggatactatttcagcacctgtaagggaaggcaaggcccgtgcccagggcttgcct 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 attatggatactatttcagcacctgtaagggaaggcaaggcccgtgcccagggcttgcct 573
Query: 373 aggctcttcttggcagcttcccttcttgtcaaacataaccacttactatcttgatgatga 432
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 gggctcttcttggcagcttcccttcttgtcaaacataaccacttactatcttgatgatga 633
Query: 433 aattgggaaactggtttttaaatgaatcatattttgtgtcaattcatgtccacaaagtaa 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 aattgggaaactggtttttaaatgaatcatattttgtgtcaattcatgtccacaaagtaa 693
Query: 493 tttttaataacaagaagagatatgagaaatacacaacatcactttgaccatatcaccttg 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 tttttaataacaagaagagatatgagaaatacacaacatcactttgaccatatcaccttg 753
Query: 553 actagccagtctccatagtgacactgctgggtttacacgcttgcctccttgcttggcttt 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 actagccagtctccatagtgacactgctgggtttacacgcttgcctccttgcttggcttt 813
Query: 613 tatgtgcctga 623
|||||||||||
Sbjct: 814 tatgtgcctga 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1024
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1014
Effective search space: 621582
Effective search space used: 621582
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no481_c21.g1 MSMg01no481_c21.g1 CHROMAT_FILE:
MSMg01no481_c21.g1 PHD_FILE: MSMg01no481_c21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:44 2005
(553 letters)
>mm_chr10_9168787_9169739
Length = 953
Score = 1000 bits (517), Expect = 0.0
Identities = 544/553 (98%)
Strand = Plus / Minus
Query: 1 agatacatgaagcacagatttagtgcctgacctcttgcaagcatccagtgttaggtatca 60
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 753 agatacatgaagcacagatttagtgcctgacctcttgcaagtgtccagtgttaggtatca 694
Query: 61 tcatacaggagtctaaaaaggcaagcttgcaatggcccaagagctacttgacttctagag 120
||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 693 tcacacaggagtctaaaaaggcaagcttgcaatggcccaagagctacttggcttctagag 634
Query: 121 aataaagcttcattgtttcttttcaatgctggtattttcttatttcaatccctcatcttt 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 633 aataaagcttcattgtttcttttcaatactggtattttcttatttcaatccctcatcttt 574
Query: 181 ttgtgcattttgtttcccccttccttttttgaatgtagaaatagatgtgtaaaattcaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ttgtgcattttgtttcccccttccttttttgaatgtagaaatagatgtgtaaaattcaag 514
Query: 241 cgttcatatgagcatctaattcaattatgaattcttgctagactccgtgtttcctgccct 300
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 513 cgttcatatgagcatctaattcaattatgaattcttgctggactccgtgtttcctgccct 454
Query: 301 cactccaaacctcccagcacatacactcccatgccattcaaatcaggtgtaatggtcctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 cactccaaacctcccagcacatacactcccatgccattcaaatcaggtgtaatggtcctg 394
Query: 361 tcttccggtgccttaacttttgaaagagaaaacaagattaataaattatgatcatatgta 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tcttcctgtgccttaacttttgaaagagaaaacaagattaataaattatgatcatatgta 334
Query: 421 catatttgctttctttggctgaaagaggatatctttatacccttttaaaagctcatgaca 480
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 catatttgctttctgtggctgaaagaggatatctttatacccttttaaaagctcatgaca 274
Query: 481 ttgatgtgttctcaatgttcaagtaatgatatttgcacagtttggcccagttatagagca 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ctgatgtgttctcaatgttcaagtaatgatatttgcacagtttggcccagttatagagca 214
Query: 541 tagatatattcac 553
|||||||||||||
Sbjct: 213 tagatatattcac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
