Query= MSMg01no481_h10.b1 MSMg01no481_h10.b1 CHROMAT_FILE:
MSMg01no481_h10.b1 PHD_FILE: MSMg01no481_h10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:06 2005
(641 letters)
>mm_chr10_115120962_115122002
Length = 1041
Score = 828 bits (428), Expect = 0.0
Identities = 448/456 (98%), Gaps = 3/456 (0%)
Strand = Plus / Minus
Query: 189 caaagcagatagtgtgattattt---aaaaaaaaaaaaaagtctctcagaggaaaagaca 245
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1041 caaagcagatagtgtgattatttaaaaaaaaaaaaaaaaagtctctcagaggaaaagaca 982
Query: 246 tctgatctggggctggagtgaagggaagaggaaaggagccagtgtgcgatttgggaaagg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981 tctgatctggggctggagtgaagggaagaggaaaggagccagtgtgcgatttgggaaagg 922
Query: 306 aatcttcctaacagaaagatcagcaaatgcaaaccctgtagggttagcacgggatcttgg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 aatcttcctaacagaaagatcagcaaatgcaaaccctgtagggttagcacgggatcttgg 862
Query: 366 cactttccaagaacagcaagttctccctcgacttcaaaggtaagttggaaagtcatgaag 425
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 861 cactttccaagaacagcaagttctccctcgccttcaaaggtaagttggaaagtcatgaag 802
Query: 426 acgtccaaacatagtcacaaagtgcaacccaacaaacgcttcctccattcgtgtatggaa 485
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 801 acgtccaaacatagtcacaaagtgcaacccaacaaacgcttcctccattcatgtatggaa 742
Query: 486 acttcctggggaggtaccgtcctctggctattctttcccaagagaaattctgaaaacttg 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acttcctggggaggtaccgtcctctggctattctttcccaagagaaattctgaaaacttg 682
Query: 546 ggatgtttaagaacctcacacttaattcatctatctgttgaatggcatgccatgaaagag 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggatgtttaagaacctcacacttaattcatctatctgttgaatggcatgccatgaaagag 622
Query: 606 cgagaattctcctcgggagccacttgcttccatact 641
|||||||||||| |||||||||||||||||||||
Sbjct: 621 tgagaattctccttaggagccacttgcttccatact 586
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space: 650561
Effective search space used: 650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no481_h10.g1 MSMg01no481_h10.g1 CHROMAT_FILE:
MSMg01no481_h10.g1 PHD_FILE: MSMg01no481_h10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:06 2005
(647 letters)
>mm_chr10_114941468_114942514
Length = 1047
Score = 1123 bits (581), Expect = 0.0
Identities = 630/647 (97%), Gaps = 2/647 (0%)
Strand = Plus / Plus
Query: 1 actaaaggattcttgtcggtttttatacccgggagaaataagcgcccagcttcttcctca 60
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 201 actaaaggattcttgtcggtttttatacccgggagaaacaagcacccagcttcttcctca 260
Query: 61 aacccctttgtgtgaggcgagccatctctttgcttcctctagagcctctcagccttccta 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacccctttgtgcgaggcgagccatctctttgcttcctctagagcctctcagccttccta 320
Query: 121 atgctgttaagaactctttaatacagttccatgttgtggtgaccccagccataaaattag 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgctgttaagaactctttaatatagttccatgttgtggtgaccccagccataaaattag 380
Query: 181 ttttgttcctactttgtaactgtaagtctgccgctgttatgaactttaatgtaaatatct 240
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 ttttgttcctactttgtaactgtaagtctgctactgttatgaactttaatgtaaatatct 440
Query: 241 gatatgcggaatatttgctatgcgactcggtgaaaggatgatttgacccccaaaggggtc 300
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatatgcagaatatttgctatgtgactcggtgaaaggatgatttgacccccaaaggggtc 500
Query: 301 ccaacccataggctgagaaccactgacctagaatcatcttcttctgctctcttctgctct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccaacccataggctgagaaccactgacctagaatcatcttcttctgctctcttctgctct 560
Query: 361 tttgaagcaacctcgtttctgagatttctaatttctataccctaaactcctttggtagca 420
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcgaagcaacctcatttctgagatttctaatttctataccctaaactcctttggtagca 620
Query: 421 gtttgtacccggatggtgggttataggatctgtgctttgtattctgcctgtcatgtaaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtttgtacccggatggtgggttataggatctgtgctttgtattctgcctgtcatgtaaca 680
Query: 481 catagcccagggcttgccctttgaacctagtctaaagttctcaagaaatgctgggggcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 catagcccagggcttgccctttgaacctagtctaaagttctcaagaaatgctgggggcat 740
Query: 541 ggtgcattgcccaaatagcatttagccagtagttaaaataaagaccaacaacggtcctcc 600
||||||||||||||| ||||| |||| ||||||||||||| |||||||||||||| |||
Sbjct: 741 ggtgcattgcccaaacagcatatagctagtagttaaaata--gaccaacaacggtcttcc 798
Query: 601 agtatgggtcactcccttctccaagggccatttcccctaatagaatt 647
|||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 799 agtatgggtcactcccttctccaaggcccatttcccctaatagaatt 845
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
