Query= MSMg01no481_n04.b1 MSMg01no481_n04.b1 CHROMAT_FILE:
MSMg01no481_n04.b1 PHD_FILE: MSMg01no481_n04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:35 2005
(447 letters)
>mm_chr10_37516358_37517204
Length = 847
Score = 764 bits (395), Expect = 0.0
Identities = 398/399 (99%)
Strand = Plus / Plus
Query: 5 gaattcaatatctattctgaacaaatgtattccatgatcttttgagaaatatcagaaaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatatctattctgaacaaatgtattccatgatcttttgagaaatatcagaaaaa 264
Query: 65 atgctaaagtttgatttgttttatatttgtttaagtaaaaatttgactcaaggtcatgga 124
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 265 atgctaaagtttgatttgttttatatttgtttaagtaaaaatttgattcaaggtcatgga 324
Query: 125 ataggaaaatggtcactgctatttagataggcgttgttgcaagcagttgggtaggaggaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ataggaaaatggtcactgctatttagataggcgttgttgcaagcagttgggtaggaggaa 384
Query: 185 gaagatagaaaagggagaaaaaagtaacatattggaaaatctaaaaaacaatttcataaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaagatagaaaagggagaaaaaagtaacatattggaaaatctaaaaaacaatttcataaa 444
Query: 245 acaaagctgatgagttagagaaaacagcctgtgcatctcctcagcttgcttttttcagac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acaaagctgatgagttagagaaaacagcctgtgcatctcctcagcttgcttttttcagac 504
Query: 305 ccccaacaggaggaagtaattctgctctctaagggttggaaagtggaatactttcaatta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ccccaacaggaggaagtaattctgctctctaagggttggaaagtggaatactttcaatta 564
Query: 365 gaatgaagccttaggtctgttctctctctctctctctct 403
|||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaatgaagccttaggtctgttctctctctctctctctct 603
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 134
Number of extensions: 39
Number of successful extensions: 39
Number of sequences better than 10.0: 1
Number of HSP's gapped: 39
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no481_n04.g1 MSMg01no481_n04.g1 CHROMAT_FILE:
MSMg01no481_n04.g1 PHD_FILE: MSMg01no481_n04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:35 2005
(669 letters)
>mm_chr10_37711256_37712324
Length = 1069
Score = 632 bits (327), Expect = 0.0
Identities = 342/347 (98%), Gaps = 2/347 (0%)
Strand = Plus / Minus
Query: 1 tactgaacatctaagaagggaatcattccaatttccaataatatttctcagaacaaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tactgaacatctaagaagggaatcattccaatttccaataatatttctcagaacaaagaa 287
Query: 61 atgaagaaaatacattagaacaaattaaataagaccaccattacaccgatgtcaacttga 120
|||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 atgaaggaaatacattagaccaaattaaataagaccaccattacaccgatgtcaacttga 227
Query: 121 gacaaagatccaagggaaaagtgttgctcatgaatgtaaatgcaaata-tgttcaacaaa 179
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 226 gacaaagatccaagggaaaagtgttgctcatgaatgtaaatgcaaatagt-ttcaacaaa 168
Query: 180 gtgtggataaatcaaattttaaaatgtacaaaatgattataaaatctactacataggatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 gtgtggataaatcaaattttaaaatgtacaaaatgattataaaatctactacataggatt 108
Query: 240 aattgagatatgccaaattgctttaacatttgaaaattgatatgatttataacagtaata 299
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 aattgagatatgacaaattgctttaacatttgaaaattgatatgatttataacagtaata 48
Query: 300 ggatctaagttaaattaggatattaagaccatgtcaatggatgcaag 346
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 ggatctaagttaaattaggatattaagaccatgtcaatggatgcaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space: 697881
Effective search space used: 697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
