Query= MSMg01no482_k23.b1 MSMg01no482_k23.b1 CHROMAT_FILE:
MSMg01no482_k23.b1 PHD_FILE: MSMg01no482_k23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:39 2005
(595 letters)
>mm_chr10_18132739_18133736
Length = 998
Score = 955 bits (494), Expect = 0.0
Identities = 572/600 (95%), Gaps = 7/600 (1%)
Strand = Plus / Minus
Query: 1 taaataaaacaaaacaaaatacagttctaaaaaatctttcatcatctagtgaagatattt 60
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 798 taaacaaaacaaaacaaaatacagttct-aaaaatctttcatcatctagtgaagatattt 740
Query: 61 cagcaatggaaagaagcaaaaccgactcacttgcaagctgaggcactcgcagggagccgt 120
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 739 cagcaacagaaagaagcaagcccgactcacttgcaagctgaggcactcgcagggagccgt 680
Query: 121 tacctcactagtaagatgccttaagccacttaaggaagtgtctaatcttcaaactagcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tacctcactagtaagatgccttaagccacttaaggaagtgtctaatcttcaaactagcca 620
Query: 181 caaactttttcaagttaataagggaggatattggatcaaacatcatttcaataaaaactc 240
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 619 caaactttttcaagttaaaaagggaggatattggatcaaacatcattttaataaaaactc 560
Query: 241 cacaactgaattaccaaacaaggatcatttttacaataaaacaaggtacagaggcaactg 300
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 559 cacaattgaattaccaaacaagggtcatttttacaataaaacaaggtacagaggcaactg 500
Query: 301 agacca-ccattctaaaatgaaaaagagacaa----aggccaataaagggtagtctcagc 355
|||| | ||||||||||| ||||||||||||| ||| ||||||||||||||||||||
Sbjct: 499 agac-agccattctaaaaggaaaaagagacaatcaaaggtcaataaagggtagtctcagc 441
Query: 356 agaaccgataaaatattacacagcactctgtctctttcacagaatgtcaacttccatagg 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggaaccgataaaatattacacagcactctgtctctttcacagaatgtcaacttccatagg 381
Query: 416 aatttaagaaggaaaacaagttggcagacactgagagcatttgtcatagtgcatttgtta 475
|||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aattgaagaaggaaaagaagctggcagacactgagagcatttgtcatagtgcatttgtta 321
Query: 476 agataaaatccatttaaccactttcctgatagagtaaccctcagaataaataaagcatgt 535
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 320 agataaaatccatttaaccactttcctgatagagtaaccctcagaacaaataaagcgtgt 261
Query: 536 ttagtttgaagcgccaaattggaatgttactttaacaatacttaccaaccccttttagcc 595
|||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 260 ttagttcgaagcgccaaatcagaatgttactttaacaatacttaccaacgccttttagcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 998
Length adjustment: 10
Effective length of query: 585
Effective length of database: 988
Effective search space: 577980
Effective search space used: 577980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no482_k23.g1 MSMg01no482_k23.g1 CHROMAT_FILE:
MSMg01no482_k23.g1 PHD_FILE: MSMg01no482_k23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:39 2005
(471 letters)
>mm_chr10_17972478_17973348
Length = 871
Score = 880 bits (455), Expect = 0.0
Identities = 467/471 (99%)
Strand = Plus / Plus
Query: 1 agtatgtagccaagatgggacttaaatatgttttgatcctcttgcctctgcctcctacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtatgtagccaagatgggacttaaatatgttttgatcctcttgcctctgcctcctacag 260
Query: 61 tgtttgggttgcaggtgtgaacctcaaaccccagcagctaaacatattttaataaaggag 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtttgggttgcaggtatgaacctcaaaccccagcagctaaacatattttaataaaggag 320
Query: 121 gataggtctgggcatgatactgcatgtctgtaatgatggcatttgggaggtggaggtatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gataggtctgggcatgatactgcatgtctgtaatgatggcatttgggaggtggaggtatc 380
Query: 181 aggaagacagcctgagctattggatgagctagggggtgagggggagtcagaggaccagac 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagaagacagcctgagctattggatgagctagggggtgagggggagtcagaggaccagac 440
Query: 241 attgctacaaggtagtgtcttctatatgtatggtgaagctacacccataaaatctcagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attgctacaaggtagtgtcttctatatgtatggtgaagctacacccataaaatctcagca 500
Query: 301 atgtggttgcccaagcagacatgaaaattgataccaccagttaacataccattgtggact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgtggttgcccaagcagacatgaaaattgataccaccagttaacataccattgtggact 560
Query: 361 cggaaggttatatttataaataatatatatgtagcaacaagaattaaagaataagaggcc 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 561 cggaaggttatatttataaataatatatatgtagcaacaagaattaaagaataagaagcc 620
Query: 421 atgaatttaagagggagtagggaggaattggggggagaaagaagtgtggaa 471
||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 621 atgaatttaagagggagtagggaggaattagggggagaaagaagtgtggaa 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
