Query= MSMg01no482_n10.b1 MSMg01no482_n10.b1 CHROMAT_FILE:
MSMg01no482_n10.b1 PHD_FILE: MSMg01no482_n10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:50 2005
(394 letters)
>mm_chr10_110891379_110892172
Length = 794
Score = 748 bits (387), Expect = 0.0
Identities = 393/395 (99%), Gaps = 2/395 (0%)
Strand = Plus / Plus
Query: 1 gtaactgagcagaagggttggtccattctacgct-aggttgctggaggccatacttcaaa 59
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 201 gtaactgagcagaagggttggtccattctac-cttaggttgctggaggccatacttcaaa 259
Query: 60 gctgctttgattcttgcgtcaactccttcttcacttctgaacacaagaggaacaccgggg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gctgctttgattcttgcgtcaactccttcttcacttctgaacacaagaggaacaccgggg 319
Query: 120 ataaagaccggtgcagatacattggcacacagctcctctgatatgctacagatcataagg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ataaagaccggtgcagatacattggcacacagctcctctgatatgctacagatcataagg 379
Query: 180 aggggcagtaaaggcttcgtctgttttctgttgctctaacagagtccctaagaccaagta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aggggcagtaaaggcttcgtctgttttctgttgctctaacagagtccctaagaccaagta 439
Query: 240 gtgtataaagaaaagacatttatttcacttatacatgtggagcctaggatgtccaagaag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtgtataaagaaaagacatttatttcacttatacatgtggagcctaggatgtccaagaag 499
Query: 300 acggatccagcgtttgctcagacctgggatgagtcttcttgctgcgttgtgataggatga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 acggatccagcgtttgctcagacctgggatgagtcttcttgctgcgttgtgataggatga 559
Query: 360 tggatcacgtggtgatattggagaaggatggcccc 394
|||||||||||||||||||||||||||||||||||
Sbjct: 560 tggatcacgtggtgatattggagaaggatggcccc 594
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 794
Length adjustment: 9
Effective length of query: 385
Effective length of database: 785
Effective search space: 302225
Effective search space used: 302225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no482_n10.g1 MSMg01no482_n10.g1 CHROMAT_FILE:
MSMg01no482_n10.g1 PHD_FILE: MSMg01no482_n10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:50 2005
(193 letters)
>mm_chr10_111055564_111056149
Length = 586
Score = 277 bits (143), Expect = 4e-79
Identities = 179/193 (92%), Gaps = 7/193 (3%)
Strand = Plus / Minus
Query: 1 tcattttcagacccatcgttctgaactcttagatgctccagggttcctctttgggggcgg 60
||||||||||||||||||||||||||||||||||| ||||||| |||| |||| ||
Sbjct: 386 tcattttcagacccatcgttctgaactcttagatgttccaggg-ccctc-ttgg----gg 333
Query: 61 gggggggggaggttaagttgctgcctctgtctgatctctggatcgcttctgatgcttctg 120
||| ||||| | ||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 332 gggaggggg-gcttaagttgctgcctctggcggatctctggatcgcttctgatgcttctg 274
Query: 121 caccgtttctgggtgtgtctggagcagaaaaagaaaagacaacttaggagaagcctttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 caccgtttctgggtgtgtctggagcagaaaaagaaaagacaacttaggagaagcctttac 214
Query: 181 tggtgtctggtgt 193
||| |||||||||
Sbjct: 213 tggggtctggtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 586
Length adjustment: 8
Effective length of query: 185
Effective length of database: 578
Effective search space: 106930
Effective search space used: 106930
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
