Query= MSMg01no484_b14.b1 MSMg01no484_b14.b1 CHROMAT_FILE:
MSMg01no484_b14.b1 PHD_FILE: MSMg01no484_b14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:32 2005
(655 letters)
>mm_chr10_49247756_49248809
Length = 1054
Score = 1228 bits (635), Expect = 0.0
Identities = 650/655 (99%), Gaps = 1/655 (0%)
Strand = Plus / Minus
Query: 1 tcttgttcattgcacacaaactctaactcagaaagctacttagcaaatgatttttgcata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 tcttgttcattgcacacaaactctaactcagaaagctacttagcaaatgatttttgcata 795
Query: 61 gttagtagtgtgggggagactattagataagaatacttactttcaactaggagctcttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 gttagtagtgtgggggagactattagataagaatacttactttcaactaggagctcttcc 735
Query: 121 ttcatcctacaactgcatggatttttggttctctctgtcaggtattattcatttctctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 ttcatcctacaactgcatggatttttggttctctctgtcaggtattattcatttctctta 675
Query: 181 ctttgtcagataaaaaatgacaggcacatttctcatcactgaaaatttcaatacaaaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ctttgtcagataaaaaatgacaggcacatttctcatcactgaaaatttcaatacaaaaag 615
Query: 241 agttttatttaaaatcattgacagtcaaaaattgataagcattgtataaaagggaaagca 300
|| || || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 agcttgatctaaaatcattgacagtcaaaaattgataagcattgtataaaagggaaagca 555
Query: 301 agctcattttcttccaatctttgaacaaagcttaaaatattctgctaattacccatacac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 agctcattttcttccaatctttgaacaaagcttaaaatattctgctaattacccatacac 495
Query: 361 ttttcaaagttatgatttacatttccttaatgttaccagcatgtctaaggtgcgggggag 420
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 494 ttttcaaagttatgatttacatttccttaatattaccagcatgtctaaggtgcggggga- 436
Query: 421 ggggaagagtgctgttttgcaccattctttgtagtagctctttcttctaattgctcaatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ggggaagagtgctgttttgcaccattctttgtagtagctctttcttctaattgctcaatg 376
Query: 481 aagattatcaaataaaagaatgcaccacactagattatttgtattaggtatattagaagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aagattatcaaataaaagaatgcaccacactagattatttgtattaggtatattagaagt 316
Query: 541 atatggaacaaacatattcacagtttctctaatatcaactatttttttcttactaatggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 atatggaacaaacatattcacagtttctctaatatcaactatttttttcttactaatggg 256
Query: 601 taaaggtcagtgttacccaattttatgtaccaggaataattgaagttaattgttc 655
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 taaaggtcagtgttacccaattttatgtaccaggaataattgaagttaattgttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1054
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1044
Effective search space: 673380
Effective search space used: 673380
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no484_b14.g1 MSMg01no484_b14.g1 CHROMAT_FILE:
MSMg01no484_b14.g1 PHD_FILE: MSMg01no484_b14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:32 2005
(663 letters)
>mm_chr10_49137045_49138107
Length = 1063
Score = 1243 bits (643), Expect = 0.0
Identities = 658/663 (99%), Gaps = 1/663 (0%)
Strand = Plus / Plus
Query: 1 caatggcctagtgaataggtgggtttaccatgaaagagttagggaaccaccctgagacag 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 caatggcctagtgaataggagggtttaccatgaaagagttagggaaccaccctgagacag 261
Query: 61 gtttcttcagtaggcctaaagaaacagcataatcaggcatttactaagaacccctggtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gtttcttcagtaggcctaaagaaacagcataatcaggcatttactaagaacccctggtgg 321
Query: 121 tgggcttaacaatagactagcattatacctggctcccttcttagtggcagctgcctgatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tgggcttaacaatagactagcattatacctggctcccttcttagtggcagctgcctgatc 381
Query: 181 cctgacttcttttgatgtatatattccttttgtattgtgtcactgtaagtcagcggatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cctgacttcttttgatgtatatattccttttgtattgtgtcactgtaagtcagcggatgt 441
Query: 241 atcttgcctggtttcttgtagctcttctgtataaaaagtatgatgctcaacttgaaaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 atcttgcctggtttcttgtagctcttctgtataaaaagtatgatgctcaacttgaaaaat 501
Query: 301 tatattcatattctccacaatctctcctgttgattctgtttgccattcattctccaaccc 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 502 tatattcatattctccacaatctctcctgttgattctgtttgccattcattcgccaaccc 561
Query: 361 cttgtccacctgctaccagagacctgttctacacagacaggtaccaaaaagtgtctgcgg 420
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 562 cttgtccacctgctaccagagacctgttctacacagacaggtaa-aaaaagtgtctgcgg 620
Query: 421 cagcccagtaccctgatgatattacacttctctttctctttaatgagaatttatttgtta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagcccagtaccctgatgatattacacttctctttctctttaatgagaatttatttgtta 680
Query: 481 tttctggattatataattgtaaacctaataaatgcgggtttatttttccaaccaaatatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tttctggattatataattgtaaacctaataaatgcgggtttatttttccaaccaaatatt 740
Query: 541 ctaaccagactcaagtttcagaagttatcaaaatgtattaattactttgctcaaatcaat 600
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctaaccagactcatgtttcagaagttatcaaaatgtattaattactttgctcaaatcaat 800
Query: 601 gtttaaggttggctcacagtttgaggtacagttcatcatagtgggaaaattgggcaatag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gtttaaggttggctcacagtttgaggtacagttcatcatagtgggaaaattgggcaatag 860
Query: 661 gaa 663
|||
Sbjct: 861 gaa 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
