NAACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTTTCCTTTCGTTGGATTAGCCATATATTTATGTTCACACCA
ATGAGAAAATTACAAAATAGAAGAGCTGGTAATGAGAAATGGTGACATTT
TTTGACTACCTGTATTATAGGTGATTGGTTTGGACCAATGAATGGAGAAG
AACACAATGATATGGACAGAAGTCTCCTATGGCAGGGCTGCACTACTTTA
TAATGATGACAGTAGAATCCTGTATAATTCAAGGTGGGAAATTTAGATAT
TATTGGATCATTTCTGTTATATTCCAAGGGAAACAAAGTCTGACTGCTTT
CTTTTCATGTCCTGATATATGAACTGGGGCTGAATTCAATATTCAAACAT
GGCCAATTTTAAGTCTATGTGCTTTGTAGGCAACCAAGAACTACTAAAAC
ATTTAGGAGGAGGAAAAGACAGGCAATGCATAATATGAACTATTTGCTAT
CATTCTTCAAAATGTCTCCCTGTGATGTTATCACAAGCAACCAATGAATC
ATTGCTTGACAGAGTTATTTTTCCTCAATTTCTGTACCACAACCAGTGTC
CTGGTGATTTTTCTAATAGCTGTGACCAAATCTCAAAGCAGAAGCCCCTC
AAGGGAAGAAGAGTTTATTTGTGCACAGGCTTTCAAGACACACAGAAGCC
ATGGTGGTATGAGCATGCGTTTGCTTATAGTTCTCAGTAGATATATTTTT
GTTGCT

NNNNCCGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGATTTGCCAGGAGTGTC
TTAAGACCAATATTGGTGCAGCTGCAAGCTCTCATGTACCACCAAGTGCA
GTCCTTCCAGAGCCAATGTTTCTTAGAGGTTCAAACAGCTTTATAACAAT
TTCTAAGTCTCTATGGATTGACCCAAATATAGCAAAGGCTTTGGTGGAAC
ATTTCACTCAAAGCCAGACACAAATGTTTTACTATATATTTTATTTAAAT
GAAACATAAAGGCTTGACTATACATATCATTACACCTGCACAAGAAGAAC
TTAACATCTCTGAAGAAAGAAATCTCAAAATATCATTTCTACTGTTAAAG
TGCTGTGCAATTCAGAGAACTAGTTTCCACATCTTTGTGCAAATTATTAT
TTATAAATTCGTTAAAAAATATTTTCAAGTATTAAGCAGAATATATAACT
AATTAAATATAATTTACTGAGTACATATTTTCTCATTTGCTGGATTGCAG
TGTCTCAACACATGCTATTCCTTGAATACAAGAAACCACAGCTGCCATTG
AAATATATTAAGGGTAAGTGTAGGAGGACAGAAAAGCTAGCAGGGCTTTC
GTTACTGTTTACAGATATTACTTACTACTAGATACAATTTATAGAGGACC
AACAATTCCCATCTCTCATACAGCAACATTTTATAGTAAATGTGCAGTAT
GA

Query= MSMg01no484_d10.b1 MSMg01no484_d10.b1 CHROMAT_FILE:
MSMg01no484_d10.b1 PHD_FILE: MSMg01no484_d10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:41 2005
         (707 letters)



>mm_chr10_57677820_57678926
          Length = 1107

 Score = 1294 bits (669), Expect = 0.0
 Identities = 696/705 (98%), Gaps = 2/705 (0%)
 Strand = Plus / Minus

                                                                        
Query: 5    gaattctttcctttcg-ttggattagccatatatttatgttcacaccaatgagaaaatta 63
            |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1093 gaattctttcctttggtttggattagccatatatttatgttcacaccaatgagaaaatta 1034

                                                                        
Query: 64   caaaatagaagagctggtaatgagaaatggtgacatt-ttttgactacctgtattatagg 122
            ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1033 caatatagaagagctggtaatgagaaatggtgacattcttttgactacctgtattatagg 974

                                                                        
Query: 123  tgattggtttggaccaatgaatggagaagaacacaatgatatggacagaagtctcctatg 182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973  tgattggtttggaccaatgaatggagaagaacacaatgatatggacagaagtctcctatg 914

                                                                        
Query: 183  gcagggctgcactactttataatgatgacagtagaatcctgtataattcaaggtgggaaa 242
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913  gcagggctgcactactttataatgatgacagtagaatcctgtataattcaaggtgggaaa 854

                                                                        
Query: 243  tttagatattattggatcatttctgttatattccaagggaaacaaagtctgactgctttc 302
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 853  tttagatattattggatcatttctgttatattccaagggaaacaaagtctgactactttc 794

                                                                        
Query: 303  ttttcatgtcctgatatatgaactggggctgaattcaatattcaaacatggccaatttta 362
            ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 793  ttttcatgtcctgatatatgaactggggctgaattcaatattcagtcatggccaatttta 734

                                                                        
Query: 363  agtctatgtgctttgtaggcaaccaagaactactaaaacatttaggaggaggaaaagaca 422
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733  agtctatgtgctttgtaggcaaccaagaactactaaaacatttaggaggaggaaaagaca 674

                                                                        
Query: 423  ggcaatgcataatatgaactatttgctatcattcttcaaaatgtctccctgtgatgttat 482
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 673  ggcaatgcataatatgaactatttgctatcattcttcaaaatgtctccctgtgatgtcat 614

                                                                        
Query: 483  cacaagcaaccaatgaatcattgcttgacagagttatttttcctcaatttctgtaccaca 542
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613  cacaagcaaccaatgaatcattgcttgacagagttatttttcctcaatttctgtaccaca 554

                                                                        
Query: 543  accagtgtcctggtgatttttctaatagctgtgaccaaatctcaaagcagaagcccctca 602
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553  accagtgtcctggtgatttttctaatagctgtgaccaaatctcaaagcagaagcccctca 494

                                                                        
Query: 603  agggaagaagagtttatttgtgcacaggctttcaagacacacagaagccatggtggtatg 662
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493  agggaagaagagtttgtttgtgcacaggctttcaagacacacagaagccatggtggtatg 434

                                                         
Query: 663  agcatgcgtttgcttatagttctcagtagatatatttttgttgct 707
            |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433  agcatgcgtttgcttatagttctcagtagatatatttttgttgct 389


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 707
Length of database: 1107
Length adjustment: 10
Effective length of query: 697
Effective length of database: 1097
Effective search space:   764609
Effective search space used:   764609
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)