Query= MSMg01no484_e05.b1 MSMg01no484_e05.b1 CHROMAT_FILE:
MSMg01no484_e05.b1 PHD_FILE: MSMg01no484_e05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:46 2005
(679 letters)
>mm_chr10_109650030_109651109
Length = 1080
Score = 1251 bits (647), Expect = 0.0
Identities = 668/675 (98%), Gaps = 1/675 (0%)
Strand = Plus / Minus
Query: 6 aatttaaaac-ttctactacaaagagtgggcatgggcacgcagtccatctactgcacagc 64
|||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 880 aatttaaaacaatatactacaaagagtgggcatgggcacgcagtccatctattgcacagc 821
Query: 65 taagctcttatagtctacaaacaccttgcatgattttagttttattttcctaatatgtag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 taagctcttatagtctacaaacaccttgcatgattttagttttattttcctaatatgtag 761
Query: 125 atttgtgctttttgtgctttatttctaagtggaatttctttctattattcctgtcgtgtg 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 760 atttgtgctttttgtgctttatttctaagtggaatttctttctattattcctgttgtgtg 701
Query: 185 agtttggaagccacctatcaaggtgagtaagtgaaggaaaggaaagagagtgtgtatagc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 agtttggaagccacctatcaaggtgagtaagtgaaggaaaggaaagagagtgtgtatagc 641
Query: 245 acttacggtgatctcgggtgcagtttattaatacagtatcttctcacaagggtaaaattc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 acttacggtgatctcgggtgcagtttattaatacagtatcttctcacaagggtaaaattc 581
Query: 305 tgtacttaccatcatagttgttttgggtctctcacatagcaatcatttctgggcagcata 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 tgtacttaccatcatagttgttttgggtctctcacatagcaatcatttctgggcagcata 521
Query: 365 atcctacttttaattggcacatatagcatagttcttagagaacaattttcctggagtctc 424
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 520 atcctacttttaattggcacagatagcatagttcttagagaacaattttcctggggtctc 461
Query: 425 tttcctggaatcttgttcaaccgtaataaatacagaaatagttatcagttactcaagaat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tttcctggaatcttgttcaaccgtaataaatacagaaatagttatcagttactcaagaat 401
Query: 485 atattactccaaaagtgaagttttaaaaaaacatgtgagttttgggggttttaagttctg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 atattactccaaaagtgaagttttaaaaaaacatgtgagttttgggggttttaagttctg 341
Query: 545 atttctatgtttgaatagatgaaaatgcacctgaaatttaaaaggtctcatgagcacaag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 atttctatgtttgaatagatgaaaatgcacctgaaatttaaaaggtctcatgagcacaag 281
Query: 605 tcatatcaaaagtacccttcattatgaataaagcagaggggatcttttaggtctaacaat 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tcatatcaaaagtacccttcattatgaataaagcagaggggatcttttaggtctaacaat 221
Query: 665 tttagataattaaaa 679
|||||||||||||||
Sbjct: 220 tttagataattaaaa 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1080
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1070
Effective search space: 715830
Effective search space used: 715830
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no484_e05.g1 MSMg01no484_e05.g1 CHROMAT_FILE:
MSMg01no484_e05.g1 PHD_FILE: MSMg01no484_e05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:46 2005
(579 letters)
>mm_chr10_109541106_109542089
Length = 984
Score = 1048 bits (542), Expect = 0.0
Identities = 570/584 (97%), Gaps = 9/584 (1%)
Strand = Plus / Plus
Query: 1 aactcttccgcctttcccagtgtgctgttgtctgcttgcagagtgtgtgtgtgtgtgtgt 60
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 205 aactcttccgcctttcccagtgtgctgttgtctgcttgcag----tgtgtgtgtgtgtgt 260
Query: 61 gtgtgtgtgtgtgtgtaaaactataataattacatcataattaaataagaggttagaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgtgtgtgtgtgtgtaaaactataataattacatcataattaaataagaggttagaaaa 320
Query: 121 ttgataaaacgtggagagaaggaaggatggaaattatgtaaatgaaatactcaggtatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgataaaacgtggagagaaggaaggatggaaattatgtaaatgaaatactcaggtatga 380
Query: 181 aattctcaaagagataatataattgaataaaaagggagtctgcctggattatgatttcac 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 aattctcaaagagataatataattgaataaaaagggagtctgcctgtattatgatttcac 440
Query: 241 aaggttcatactaatcttgttcatccaggtctgtacataagccacgataccccattaaag 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaggttcagactaatcttgttcatccaggtctgtacataagccacgataccccattaaag 500
Query: 301 gaagaaggcaggtcttgcataagcatccatagaacagacagcatggtgatgataccatct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaagaaggcaggtcttgcataagcatccatagaacagacagcatggtgatgataccatct 560
Query: 361 tttatggatggaatgtgaaaggtctccc-----ccaacccgaacaggccatgcctttgaa 415
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 561 tttatggatggaatgtgaaaggtctcccaacccccaacccgaacaggccatgcctttgaa 620
Query: 416 gacttgatacccagaggtggtgctgtcttaggagatcatggagccttaaagagatgggct 475
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 621 gacttgatacccagaggtggtgctgtcttaggagatcatggagccttaaagaaatgggct 680
Query: 476 tggccagtggaaggtcatcagctatgagcacctggattgtaaacggaacctgataacaga 535
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tggccggtggaaggtcatcagctatgagcacctggattgtaaacggaacctgataacaga 740
Query: 536 taataaaacttaggatcatctcctccactctcttaaagcatcga 579
|||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 741 taataaaacttaagatcatctcctccactctcttaaagcatcga 784
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 984
Length adjustment: 10
Effective length of query: 569
Effective length of database: 974
Effective search space: 554206
Effective search space used: 554206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
